RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 ZNF365Q70YC5 407 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 NLRP9Q7RTR0 991 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 ZNF720Q7Z2F6 126 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 ARHGAP22Q7Z5H3 698 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 SDCCAG8Q86SQ7 713 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-212ENST00000564503 ARHGEF19Q8IW93 802 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 C12orf56Q8IXR9 622 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 SYCP3Q8IZU3 236 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 ZCCHC9Q8N567 271 aaKnown RBP4.94□□□□□ -1.62
CAPN3-212ENST00000564503 CCDC89Q8N998 374 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 DRAXINQ8NBI3 349 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-212ENST00000564503 SLC17A8Q8NDX2 589 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 SUPT20HQ8NEM7 779 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 FNIP1Q8TF40 1166 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 TMEM174Q8WUU8 243 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 MAML1Q92585 1016 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 ITFG2Q969R8 447 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 ANAPC16Q96DE5 110 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 NSL1Q96IY1 281 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 FAM81BQ96LP2 452 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 GBP5Q96PP8 586 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 NR1H4Q96RI1 486 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-212ENST00000564503 PCDHB18PQ96TA0 734 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 APBA2Q99767 749 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 EIF2AK1Q9BQI3 630 aaKnown RBP4.94□□□□□ -1.62
CAPN3-212ENST00000564503 BTBD10Q9BSF8 475 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 RNF38Q9H0F5 515 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 VCX3BQ9H321 246 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 MMADHCQ9H3L0 296 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-212ENST00000564503 DENND2DQ9H6A0 471 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-212ENST00000564503 BCAS3Q9H6U6 928 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 VCX3AQ9NNX9 186 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 IL1RAPL1Q9NZN1 696 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 DLGAP2Q9P1A6 1054 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 ANKFY1Q9P2R3 1169 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 TBK1Q9UHD2 729 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 SLC24A2Q9UI40 661 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 ANGPTL2Q9UKU9 493 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 ZMYND8Q9ULU4 1186 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-212ENST00000564503 EMC9Q9Y3B6 208 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.94□□□□□ -1.62
CAPN3-212ENST00000564503 SLC4A7Q9Y6M7 1214 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 RPS6KL1Q9Y6S9 549 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 NFASCO94856 1347 aa4.94□□□□□ -1.62
CAPN3-212ENST00000564503 ZSWIM8A7E2V4 1837 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 SCN9AQ15858 1988 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 TRBV23OR9-2A0A075B6M9 112 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 C7orf72A4D263 438 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 FOXO6A8MYZ6 492 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 POC1B-GALNT4F8VUJ3 575 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 H0Y3Z8 333 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 DNALI1O14645 258 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-212ENST00000564503 MEIS2O14770 477 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 ATP2A1O14983 1001 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 MSH4O15457 936 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 PSTPIP1O43586 416 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 TOM1O60784 492 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 RNF8O76064 485 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 TJP3O95049 919 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 KCNH1O95259 989 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 CBX6O95503 412 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 MYBL1P10243 752 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 IL1R1P14778 569 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 GM2AP17900 193 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 KRT15P19012 456 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 KCNA3P22001 575 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 CA4P22748 312 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 RRM1P23921 792 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 TM4SF1P30408 202 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 MAPK4P31152 587 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 DNAJA1P31689 397 aaKnown RBP4.93□□□□□ -1.62
CAPN3-212ENST00000564503 SLC16A2P36021 539 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 CETN2P41208 172 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 MC3RP41968 323 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 PSMC4P43686 418 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 VAMP7P51809 220 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 PRELPP51888 382 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 CACNA2D1P54289 1103 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 SLURP1P55000 103 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 MFAP3P55082 362 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 POLE2P56282 527 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 SNRPFP62306 86 aaKnown RBP4.93□□□□□ -1.62
CAPN3-212ENST00000564503 FMO1Q01740 532 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 CYP4A11Q02928 519 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 GRAPQ13588 217 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 LAMB3Q13751 1172 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 RASA3Q14644 834 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 COG2Q14746 738 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 KRT72Q14CN4 511 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 RCN1Q15293 331 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 TRIP13Q15645 432 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-212ENST00000564503 SEPT7Q16181 437 aaKnown RBP4.93□□□□□ -1.62
CAPN3-212ENST00000564503 LRRC23Q53EV4 343 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-212ENST00000564503 ZC2HC1CQ53FD0 456 aaPredicted RBP4.93□□□□□ -1.62
CAPN3-212ENST00000564503 C6orf163Q5TEZ5 329 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 SNX30Q5VWJ9 437 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 CCDC62Q6P9F0 684 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 LVRNQ6Q4G3 990 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 SEPT14Q6ZU15 432 aa4.93□□□□□ -1.62
CAPN3-212ENST00000564503 KCTD1Q719H9 257 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms