RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 PNPLA1Q8N8W4 532 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 GATA6Q92908 595 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 TMEM245Q9H330 911 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 C6orf106Q9H6K1 298 aaPredicted RBP17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 PRSS16Q9NQE7 514 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 APOBEC2Q9Y235 224 aaKnown RBP17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 USP24Q9UPU5 2620 aa17.06■□□□□ 0.32
AC004449.1-201ENST00000564240 KNL1Q8NG31 2342 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 FAM47DPA6NHR8 397 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 PMM2O15305 246 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 RNASEH1O60930 286 aaKnown RBP17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 MOCS3O95396 460 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 GNA14O95837 355 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 CD70P32970 193 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 ACSL1P33121 698 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 SUZ12Q15022 739 aaKnown RBP17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 HLA-BQ31612 363 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 MPP7Q5T2T1 576 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 ADAT2Q7Z6V5 191 aaKnown RBP17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 ARHGEF19Q8IW93 802 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 HJURPQ8NCD3 748 aaPredicted RBP17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 SERPINB11Q96P15 392 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 SRRTQ9BXP5 876 aaKnown RBP17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 PCED1AQ9H1Q7 454 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 FBRSQ9HAH7 460 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 IL21RQ9HBE5 538 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 TM7SF3Q9NS93 570 aa17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 RALYQ9UKM9 306 aaKnown RBP17.05■□□□□ 0.32
AC004449.1-201ENST00000564240 PCDH15Q96QU1 1955 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 GOLGA8CPA6NN73 597 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 SART1O43290 800 aaKnown RBP17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 MED7O43513 233 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 GJB3O75712 270 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 GABBR2O75899 941 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 FGFR1OPO95684 399 aaKnown RBP17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 SEMA4FO95754 770 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 IGLV3-19P01714 112 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 AFPP02771 609 aaKnown RBP17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 FTH1P19P0C7X4 201 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 SLC6A4P31645 630 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 USP8P40818 1118 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 ACADSBP45954 432 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 RPS14P62263 151 aaKnown RBP17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 ZBTB16Q05516 673 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 RING1Q06587 406 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 SFSWAPQ12872 951 aaKnown RBP17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 CDH18Q13634 790 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 NUMA1Q14980 2115 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 ZNF776Q68DI1 518 aaPredicted RBP17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 FIBINQ8TAL6 211 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 ADAM32Q8TC27 787 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 WFDC5Q8TCV5 224 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 RHBDD1Q8TEB9 315 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 AZIN2Q96A70 460 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 ZSWIM1Q9BR11 485 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 IRX2Q9BZI1 471 aaPredicted RBP17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 UBE2TQ9NPD8 197 aaPredicted RBP17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 NAALADL1Q9UQQ1 740 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 LAMA1P25391 3075 aa17.04■□□□□ 0.32
AC004449.1-201ENST00000564240 PPP1R3GB7ZBB8 358 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 LETM1O95202 739 aaPredicted RBP17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 APOEP02649 317 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 AFF3P51826 1226 aaKnown RBP17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 GCNT1Q02742 428 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 PTPRNQ16849 979 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 FAM133BQ5BKY9 247 aaKnown RBP17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 RNF219Q5W0B1 726 aaPredicted RBP17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 TTI2Q6NXR4 508 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 KIAA0907Q7Z7F0 614 aaPredicted RBP17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 ELOA2Q8IYF1 753 aaPredicted RBP17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 CFAP52Q8N1V2 620 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 LMO3Q8TAP4 145 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 DQX1Q8TE96 717 aaKnown RBP17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 TRIM62Q9BVG3 475 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 TMEM121BQ9BXQ6 578 aaPredicted RBP17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 INTS2Q9H0H0 1204 aaKnown RBP17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 MTG2Q9H4K7 406 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 SGK2Q9HBY8 427 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 TJP2Q9UDY2 1190 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 SLC12A6Q9UHW9 1150 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 TLR6Q9Y2C9 796 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 CKAP5Q14008 2032 aa17.03■□□□□ 0.32
AC004449.1-201ENST00000564240 THAP12O43422 761 aa17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 IGLV3-27P01718 113 aa17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 ASLP04424 464 aa17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 CSKP41240 450 aa17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 RPS24P62847 133 aaKnown RBP17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 PAK1Q13153 545 aa17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 NADSYN1Q6IA69 706 aa17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 DENND1BQ6P3S1 775 aa17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 LRSAM1Q6UWE0 723 aa17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 RAB44Q7Z6P3 723 aaPredicted RBP17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 DHX40Q8IX18 779 aaKnown RBP17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 LGI2Q8N0V4 545 aa17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 RNF34Q969K3 372 aa17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 FCRL2Q96LA5 508 aaPredicted RBP17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 OMDQ99983 421 aa17.02■□□□□ 0.32
AC004449.1-201ENST00000564240 FBXL12Q9NXK8 326 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms