RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PMS2P1A4D2B8 440 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 FAM47DPA6NHR8 397 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 ZNF233A6NK53 670 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 LATO43561 262 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 SDC3O75056 442 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 PRPF6O94906 941 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 GCNT3O95395 438 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 CKMT1AP12532 417 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 MAP3K7CLP57077 242 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 TNNC1P63316 161 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 HMGN5P82970 282 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 SERINC3Q13530 473 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 SURF1Q15526 300 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 FNDC3BQ53EP0 1204 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 RILPL1Q5EBL4 403 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 ZNF776Q68DI1 518 aaPredicted RBP8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 XKR5Q6UX68 686 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 CCDC81Q6ZN84 652 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 CHST9Q7L1S5 443 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 KRI1Q8N9T8 703 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 MFSD2AQ8NA29 543 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 OR2T34Q8NGX1 318 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 OR4C6Q8NH72 309 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 NOC3LQ8WTT2 800 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 GOLGA1Q92805 767 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 PSMG3-AS1Q96PY0 264 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 DEPDC7Q96QD5 511 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 SEMA3CQ99985 751 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 MED10Q9BTT4 135 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 VRTNQ9H8Y1 702 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 ARHGAP20Q9P2F6 1191 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 SCML1Q9UN30 329 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 SATB2Q9UPW6 733 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 R3HCC1Q9Y3T6 440 aaKnown RBP8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 U3KQA8 63 aa8.08□□□□□ -1.12
HERPUD1-206ENST00000563343 NBASA2RRP1 2371 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 CACNA1DQ01668 2161 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 A0A1W2PP55 124 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 KIAA0391O15091 583 aaKnown RBP8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 MID1O15344 667 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 CYBBP04839 570 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 GAP43P17677 238 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 HOXD13P35453 343 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 UBA7P41226 1012 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 NEK4P51957 841 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 MYL6P60660 151 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 PPP2CBP62714 309 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 PPP2CAP67775 309 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 TLE1Q04724 770 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 EHHADHQ08426 723 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 ISXQ2M1V0 245 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 C3orf38Q5JPI3 329 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 C10orf120Q5SQS8 335 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 CLEC20AQ6ZU45 233 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 CLEC14AQ86T13 490 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 ACOT1Q86TX2 421 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 IQCHQ86VS3 1027 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 CRYBG2Q8N1P7 616 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 AADATQ8N5Z0 425 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 WFDC5Q8TCV5 224 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 SLC2A14Q8TDB8 520 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 WFIKKN2Q8TEU8 576 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 SERAC1Q96JX3 654 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 LMLNQ96KR4 655 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 CGRRF1Q99675 332 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 DCLK3Q9C098 648 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 PNPLA8Q9NP80 782 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 UCKL1Q9NWZ5 548 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 KCNK4Q9NYG8 393 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 HMGXB4Q9UGU5 601 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 FZD4Q9ULV1 537 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 PLA2G4CQ9UP65 541 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 NCKAP1Q9Y2A7 1128 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 MAN2B2Q9Y2E5 1009 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 PCDHGA8Q9Y5G5 932 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 PCDHA5Q9Y5H7 936 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 ENTPD2Q9Y5L3 495 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 USP3Q9Y6I4 520 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 SPTBN1Q01082 2364 aaKnown RBP8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 CREBBPQ92793 2442 aa8.07□□□□□ -1.12
HERPUD1-206ENST00000563343 LRRC72A6NJI9 287 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 NOBOXO60393 691 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 SIN3BO75182 1162 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 ITGB2P05107 769 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 GP1BAP07359 652 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 HMBSP08397 361 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 DLDP09622 509 aaKnown RBP8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 PABPC1P11940 636 aaKnown RBP8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 DGKAP23743 735 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 ATICP31939 592 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 SGSHP51688 502 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 KIF11P52732 1056 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 ADPRHP54922 357 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 COG7P83436 770 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 DAB2P98082 770 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 ARID5AQ03989 594 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 SRSF6Q13247 344 aaKnown RBP8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 ALCAMQ13740 583 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 PSMD6Q15008 389 aa8.06□□□□□ -1.12
HERPUD1-206ENST00000563343 CST6Q15828 149 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms