RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 SKA1Q96BD8 255 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 MCRS1Q96EZ8 462 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 HIC2Q96JB3 615 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 FAR2Q96K12 515 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 RITA1Q96K30 269 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 CCDC17Q96LX7 622 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 TAF1DQ9H5J8 278 aaPredicted RBP3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 USP29Q9HBJ7 922 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 ABHD10Q9NUJ1 306 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 FEM1BQ9UK73 627 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 PCDHB2Q9Y5E7 798 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 KAT6AQ92794 2004 aa3.68□□□□□ -1.82
SHCBP1-202ENST00000563219 LINC01548A6NM66 108 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 EFCAB8A8MWE9 144 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 UBE2Q2LH0YL09 131 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 J3KRW8 73 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 CLIC1O00299 241 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 FYB1O15117 783 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 WDR5P61964 334 aaKnown RBP3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 TLE3Q04726 772 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 SF3A3Q12874 501 aaKnown RBP eCLIP3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 SLC10A2Q12908 348 aaPredicted RBP3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 DDX10Q13206 875 aaKnown RBP3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 CBFBQ13951 182 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 MFSD13AQ14CX5 517 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 MAPRE1Q15691 268 aaKnown RBP3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 EZH2Q15910 746 aaKnown RBP3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 FAM180BQ6P0A1 224 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 TMEM65Q6PI78 240 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 VSTM1Q6UX27 236 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 SYNE3Q6ZMZ3 975 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 CHSY1Q86X52 802 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 LAS2Q8IYD9 372 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 Q8N9P0 234 aaPredicted RBP3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 GOLGA1Q92805 767 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 SDCCAG3Q96C92 435 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 HS6ST2Q96MM7 605 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 COG8Q96MW5 612 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 SEC62Q99442 399 aaKnown RBP3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 SLC26A6Q9BXS9 759 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 ADGRE3Q9BY15 652 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 BRD8Q9H0E9 1235 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 VPS16Q9H269 839 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 SAYSD1Q9NPB0 183 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 RIC8AQ9NPQ8 531 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 KIF17Q9P2E2 1029 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 C19orf53Q9UNZ5 99 aaPredicted RBP3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 PCDHB7Q9Y5E2 793 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 ZNF804BA4D1E1 1349 aa3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 FNDC1Q4ZHG4 1894 aaPredicted RBP3.67□□□□□ -1.82
SHCBP1-202ENST00000563219 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 SLC38A8A6NNN8 435 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 PRSS47A8MTI9 375 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 KIF28PB7ZC32 967 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 PROB1E7EW31 1015 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 M0QYT0 321 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 PPP6R2O75170 966 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 GCATO75600 419 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 MBD4O95243 580 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 LATS1O95835 1130 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 CYP3A4P08684 503 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 IGFBP2P18065 325 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 SFPQP23246 707 aaKnown RBP eCLIP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 THBS4P35443 961 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 TUBP50607 506 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 FOXL2P58012 376 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 FAM3BP58499 235 aaPredicted RBP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 RPL15P61313 204 aaKnown RBP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 TUBA4AP68366 448 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 RBM6P78332 1123 aaKnown RBP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 TBX2Q13207 712 aaPredicted RBP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 GAB1Q13480 694 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 SLC12A1Q13621 1099 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 RPS6KA2Q15349 733 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 DLGAP5Q15398 846 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 ADCK5Q3MIX3 580 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 TBRG1Q3YBR2 411 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 PRAMEF17Q5VTA0 474 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 SERPINA13PQ6UXR4 307 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 KYAT3Q6YP21 454 aaKnown RBP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 LRRTM4Q86VH4 590 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 TMTC1Q8IUR5 882 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 NAXEQ8NCW5 288 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 SPPL3Q8TCT6 385 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 HMGB4Q8WW32 186 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 THAP4Q8WY91 577 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 AKAP1Q92667 903 aaKnown RBP eCLIP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 USP13Q92995 863 aaPredicted RBP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 C3orf49Q96BT1 292 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 TRMT61AQ96FX7 289 aaKnown RBP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 P2RY11Q96G91 374 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 REXO5Q96IC2 774 aaKnown RBP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 TBATAQ96M53 351 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 TRAPPC9Q96Q05 1148 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 ASB2Q96Q27 587 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 PYM1Q9BRP8 204 aaKnown RBP3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 MECRQ9BV79 373 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 TWSG1Q9GZX9 223 aa3.66□□□□□ -1.82
SHCBP1-202ENST00000563219 CCDC134Q9H6E4 229 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms