RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 LIMK1P53667 647 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 ST8SIA6P61647 398 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 SLC6A3Q01959 620 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 TAF5Q15542 800 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 PTPN20Q4JDL3 420 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 TAF3Q5VWG9 929 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 MBLAC2Q68D91 279 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 NADSYN1Q6IA69 706 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 OLFML1Q6UWY5 402 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 SLC26A9Q7LBE3 791 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 ERICH1Q86X53 443 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 LGI2Q8N0V4 545 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 FRMD1Q8N878 549 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 PRCCQ92733 491 aaPredicted RBP18.47■□□□□ 0.55
CMTM3-204ENST00000562357 PRICKLE1Q96MT3 831 aaPredicted RBP18.47■□□□□ 0.55
CMTM3-204ENST00000562357 SPAG5Q96R06 1193 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 NAA15Q9BXJ9 866 aaKnown RBP18.47■□□□□ 0.55
CMTM3-204ENST00000562357 CD248Q9HCU0 757 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 FAM207AQ9NSI2 230 aaPredicted RBP18.47■□□□□ 0.55
CMTM3-204ENST00000562357 RRN3Q9NYV6 651 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 COX16Q9P0S2 106 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 MBD1Q9UIS9 605 aaPredicted RBP18.47■□□□□ 0.55
CMTM3-204ENST00000562357 STAP1Q9ULZ2 295 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 RALGAPA1Q6GYQ0 2036 aa18.47■□□□□ 0.55
CMTM3-204ENST00000562357 IGHV1OR15-9A0A0B4J2B8 117 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 H0Y626 953 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 DAB1O75553 588 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 DLDP09622 509 aaKnown RBP18.46■□□□□ 0.55
CMTM3-204ENST00000562357 TACR2P21452 398 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 PRKCHP24723 683 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 POLR2FP61218 127 aaKnown RBP18.46■□□□□ 0.55
CMTM3-204ENST00000562357 RPS24P62847 133 aaKnown RBP18.46■□□□□ 0.55
CMTM3-204ENST00000562357 RABGAP1LQ5R372 815 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 TTC39BQ5VTQ0 682 aaPredicted RBP18.46■□□□□ 0.55
CMTM3-204ENST00000562357 RAP1GAP2Q684P5 730 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 TMEM215Q68D42 235 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 RNF43Q68DV7 783 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 SND1Q7KZF4 910 aaKnown RBP eCLIP18.46■□□□□ 0.55
CMTM3-204ENST00000562357 TMPRSS6Q8IU80 811 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 SYT12Q8IV01 421 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 FIBINQ8TAL6 211 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 CYB5D2Q8WUJ1 264 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 C18orf8Q96DM3 657 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 SIPA1Q96FS4 1042 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 EDEM2Q9BV94 578 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 TMEM51Q9NW97 253 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 PAXBP1Q9Y5B6 917 aa18.46■□□□□ 0.55
CMTM3-204ENST00000562357 KCNU1A8MYU2 1149 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 LUC7L3O95232 432 aaKnown RBP18.45■□□□□ 0.54
CMTM3-204ENST00000562357 ASLP04424 464 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 CD70P32970 193 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 CDH5P33151 784 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-204ENST00000562357 NOS2P35228 1153 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 HOXD12P35452 270 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 PTGER3P43115 390 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 COPB1P53618 953 aaKnown RBP18.45■□□□□ 0.54
CMTM3-204ENST00000562357 NME3Q13232 169 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 TCEAL6Q6IPX3 200 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 DPY19L2P1Q6NXN4 242 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 RABEPKQ7Z6M1 372 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 METTL3Q86U44 580 aaKnown RBP18.45■□□□□ 0.54
CMTM3-204ENST00000562357 ADIPOR2Q86V24 386 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 ZNF677Q86XU0 584 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 CFAP52Q8N1V2 620 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 ZNF397Q8NF99 534 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-204ENST00000562357 NEK11Q8NG66 645 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 FOXJ1Q92949 421 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 TCEAL3Q969E4 200 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 NUSAP1Q9BXS6 441 aaKnown RBP18.45■□□□□ 0.54
CMTM3-204ENST00000562357 SLC6A17Q9H1V8 727 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 FBRSQ9HAH7 460 aa18.45■□□□□ 0.54
CMTM3-204ENST00000562357 KIAA1522Q9P206 1035 aaPredicted RBP18.45■□□□□ 0.54
CMTM3-204ENST00000562357 DCDC2BA2VCK2 349 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 M0QYT0 321 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 CD6P30203 668 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 OXTRP30559 389 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 SCNN1AP37088 669 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 MATKP42679 507 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 OXCT1P55809 520 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 RNASE9P60153 205 aaKnown RBP18.44■□□□□ 0.54
CMTM3-204ENST00000562357 PITX1P78337 314 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-204ENST00000562357 TYRO3Q06418 890 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 ZNF33AQ06730 810 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 LMAN2Q12907 356 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 SYCP1Q15431 976 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 SYCP2LQ5T4T6 812 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 FAM102AQ5T9C2 384 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-204ENST00000562357 STPG1Q5TH74 334 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 RNF219Q5W0B1 726 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-204ENST00000562357 KIAA0907Q7Z7F0 614 aaPredicted RBP18.44■□□□□ 0.54
CMTM3-204ENST00000562357 NOP9Q86U38 636 aaKnown RBP18.44■□□□□ 0.54
CMTM3-204ENST00000562357 OR2T3Q8NH03 318 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 CEP76Q8TAP6 659 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 WFDC5Q8TCV5 224 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 EPS8L1Q8TE68 723 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 PPP1R9BQ96SB3 815 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 MKRN2Q9H000 416 aaKnown RBP18.44■□□□□ 0.54
CMTM3-204ENST00000562357 GANQ9H2C0 597 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 NLRC4Q9NPP4 1024 aa18.44■□□□□ 0.54
CMTM3-204ENST00000562357 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms