RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 MRPL9Q9BYD2 267 aaKnown RBP6.77□□□□□ -1.33
CAPN3-210ENST00000561817 CRISPLD1Q9H336 500 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 ACBD3Q9H3P7 528 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 NMUR1Q9HB89 426 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 PCDH9Q9HC56 1237 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 MED4Q9NPJ6 270 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 ETNK2Q9NVF9 386 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 RRN3Q9NYV6 651 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 RCOR3Q9P2K3 495 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-210ENST00000561817 DCTN4Q9UJW0 460 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 FBXW11Q9UKB1 542 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 LRFN2Q9ULH4 789 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 AP4E1Q9UPM8 1137 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 NEU3Q9UQ49 428 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 ZNF148Q9UQR1 794 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 MFHAS1Q9Y4C4 1052 aa6.77□□□□□ -1.33
CAPN3-210ENST00000561817 SF3B1O75533 1304 aaKnown RBP eCLIP6.76□□□□□ -1.33
CAPN3-210ENST00000561817 KIAA1671Q9BY89 1806 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ABHD14A-ACY1A0A1B0GW23 586 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 BCLAF3A2AJT9 711 aaKnown RBP6.76□□□□□ -1.33
CAPN3-210ENST00000561817 MTMR11A4FU01 709 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 GOLGA6BA6NDN3 693 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ZBBXA8MT70 800 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 NT5C1B-RDH14C9J2C7 533 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 FAM72CH0Y354 149 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 M0QYT0 321 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 APOL1O14791 398 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 DCLK1O15075 740 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ADAM12O43184 909 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 TIMP1P01033 207 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 NUDT17P0C025 328 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 RBP3P10745 1247 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 RARGP13631 454 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ATF2P15336 505 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 GOT1P17174 413 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 AMPD1P23109 780 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ADCY8P40145 1251 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 MAGEA10P43363 369 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-210ENST00000561817 HCAR3P49019 387 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 RGS19P49795 217 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 PMS2P54278 862 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 NRLP54845 237 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 AIF1P55008 147 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 EIF3EP60228 445 aaKnown RBP6.76□□□□□ -1.33
CAPN3-210ENST00000561817 CAV1Q03135 178 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 GBE1Q04446 702 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 DEUP1Q05D60 604 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ZNF844Q08AG5 666 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ELAVL2Q12926 359 aaKnown RBP6.76□□□□□ -1.33
CAPN3-210ENST00000561817 GPR17Q13304 367 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 IKBKEQ14164 716 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 KRT81Q14533 505 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 NFE2Q16621 373 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-210ENST00000561817 CTXN3Q4LDR2 81 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 CFAP58Q5T655 872 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 FAM72AQ5TYM5 149 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 IZUMO3Q5VZ72 239 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 NCBP2-AS2Q69YL0 99 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 FAM72DQ6L9T8 149 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ZNF280DQ6N043 979 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 MSANTD2Q6P1R3 559 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 FAM72BQ86X60 149 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 SPATA2LQ8IUW3 424 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-210ENST00000561817 LRRC43Q8N309 656 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ZCCHC9Q8N567 271 aaKnown RBP6.76□□□□□ -1.33
CAPN3-210ENST00000561817 NAT8LQ8N9F0 302 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ATAD1Q8NBU5 361 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 SLC7A14Q8TBB6 771 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 CCHCR1Q8TD31 782 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 DQX1Q8TE96 717 aaKnown RBP6.76□□□□□ -1.33
CAPN3-210ENST00000561817 EDEM1Q92611 657 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 TOP1MTQ969P6 601 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ZBTB9Q96C00 473 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 CCDC114Q96M63 670 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 PWWP2AQ96N64 755 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 CNTNAP3BQ96NU0 1288 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 OLFM3Q96PB7 478 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 TMEM109Q9BVC6 243 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 CNTNAP3Q9BZ76 1288 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 PABPC3Q9H361 631 aaKnown RBP6.76□□□□□ -1.33
CAPN3-210ENST00000561817 SEMA4AQ9H3S1 761 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 DHX35Q9H5Z1 703 aaKnown RBP6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ARHGEF4Q9NR80 690 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 OSER1Q9NX31 292 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 ASIC3Q9UHC3 531 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 STAP1Q9ULZ2 295 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 SCML2Q9UQR0 700 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 PLAAQ9Y263 795 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 PCDHB5Q9Y5E4 795 aa6.76□□□□□ -1.33
CAPN3-210ENST00000561817 MYO16Q9Y6X6 1858 aa6.75□□□□□ -1.33
CAPN3-210ENST00000561817 A0A1W2PQH9 124 aa6.75□□□□□ -1.33
CAPN3-210ENST00000561817 SLC35F4A4IF30 521 aa6.75□□□□□ -1.33
CAPN3-210ENST00000561817 CFAP69A5D8W1 941 aa6.75□□□□□ -1.33
CAPN3-210ENST00000561817 KCNU1A8MYU2 1149 aa6.75□□□□□ -1.33
CAPN3-210ENST00000561817 MCF2LO15068 1137 aa6.75□□□□□ -1.33
CAPN3-210ENST00000561817 IRAK2O43187 625 aa6.75□□□□□ -1.33
CAPN3-210ENST00000561817 RIPK2O43353 540 aa6.75□□□□□ -1.33
CAPN3-210ENST00000561817 F9P00740 461 aa6.75□□□□□ -1.33
CAPN3-210ENST00000561817 ZDHHC11BP0C7U3 371 aa6.75□□□□□ -1.33
CAPN3-210ENST00000561817 LINC00271P0C7V0 271 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms