RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SLC22A3O75751 556 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 DNAJB5O75953 348 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 AGFG2O95081 481 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 SNX4O95219 450 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 LMNAP02545 664 aaKnown RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 HMGCRP04035 888 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 TUBB4AP04350 444 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 MPOP05164 745 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 TPOP07202 933 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 DLDP09622 509 aaKnown RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 FAM90A15PP0C7V4 464 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 FAM90A14PP0C7W9 464 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 MSL3P1P0C860 447 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 GPR89BP0CG08 455 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 GLI4P10075 376 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 SRCP12931 536 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 CD19P15391 556 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ZNF8P17098 575 aaPredicted RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 CTPS1P17812 591 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 TFEBP19484 476 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ITGALP20701 1170 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 FPR1P21462 350 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 KCNA5P22460 613 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 RBL1P28749 1068 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 EPHA3P29320 983 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 TM4SF1P30408 202 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 CTNNB1P35222 781 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 IL13P35225 146 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 CPOXP36551 454 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 PBX3P40426 434 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 GARSP41250 739 aaKnown RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 SSR1P43307 286 aaKnown RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 GSK3AP49840 483 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 SULT1E1P49888 294 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 GATMP50440 423 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 STAT5BP51692 787 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 KCNQ1P51787 676 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 HK2P52789 917 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 DGKQP52824 942 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 POLGP54098 1239 aaPredicted RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 NPEPPSP55786 919 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 OXCT1P55809 520 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 LOXL3P58215 753 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 STX1BP61266 288 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 RBM6P78332 1123 aaKnown RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 ADAM17P78536 824 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 IL13RA1P78552 427 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ZNF844Q08AG5 666 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 IKQ13123 557 aaPredicted RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 SEMA3BQ13214 749 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ALCAMQ13740 583 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 THOC5Q13769 683 aaKnown RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 SNTB1Q13884 538 aaKnown RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 E2F2Q14209 437 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 VEPH1Q14D04 833 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ACAP1Q15027 740 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 PPP2R5BQ15173 497 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ZNF827Q17R98 1081 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 NKPD1Q17RQ9 610 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 GEN1Q17RS7 908 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ZNF750Q32MQ0 723 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 EDRF1Q3B7T1 1238 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ZNF568Q3ZCX4 644 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 TRIM60Q495X7 471 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 CCDC40Q4G0X9 1142 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 PREPLQ4J6C6 727 aaPredicted RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 ZNF628Q5EBL2 1059 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ZNF766Q5HY98 468 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 FAM47AQ5JRC9 791 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 COLEC12Q5KU26 742 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 MANEALQ5VSG8 457 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 GKAP1Q5VSY0 366 aaPredicted RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 OLFML2BQ68BL8 750 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 FCRL6Q6DN72 434 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ABLIM2Q6H8Q1 611 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 WDR93Q6P2C0 686 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 TSSK4Q6SA08 328 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 MTHFD1LQ6UB35 978 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 SLC30A10Q6XR72 485 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 NFXL1Q6ZNB6 911 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 TOM1L2Q6ZVM7 507 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 FAM214BQ7L5A3 538 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 OTOAQ7RTW8 1153 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ZNF572Q7Z3I7 529 aaPredicted RBP2.14□□□□□ -2.07
RTF1-207ENST00000561076 SLC46A3Q7Z3Q1 461 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 CACNA2D4Q7Z3S7 1137 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 TMEM110Q86TL2 294 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 IQCHQ86VS3 1027 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 SPACA3Q8IXA5 215 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 SLC15A3Q8IY34 581 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 TMEFF1Q8IYR6 380 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 FAM185AQ8N0U4 392 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 GHDCQ8N2G8 530 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 STPG3Q8N7X2 389 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 PLA2G15Q8NCC3 412 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 TMEM116Q8NCL8 245 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 ZNF540Q8NDQ6 660 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 PIK3C3Q8NEB9 887 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 SHCBP1Q8NEM2 672 aa2.14□□□□□ -2.07
RTF1-207ENST00000561076 DNERQ8NFT8 737 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms