RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 RIPOR3Q96MK2 946 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 GCNAQ96QF7 691 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 OSBPL9Q96SU4 736 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 NAPGQ99747 312 aaPredicted RBP9.71□□□□□ -0.86
HERC1-206ENST00000559996 KLC2Q9H0B6 622 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 LINC00597Q9H2U6 94 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 KLHL11Q9NVR0 708 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 TMEM51Q9NW97 253 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 CWC15Q9P013 229 aaKnown RBP9.71□□□□□ -0.86
HERC1-206ENST00000559996 OR12D3Q9UGF7 316 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 ZMYM5Q9UJ78 669 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 SNX12Q9UMY4 172 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 AP4E1Q9UPM8 1137 aa9.71□□□□□ -0.86
HERC1-206ENST00000559996 TCRBV7S2A1N4TA0A589 114 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 E2F8A0AVK6 867 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 PDE2AO00408 941 aaPredicted RBP9.7□□□□□ -0.86
HERC1-206ENST00000559996 SCAMP3O14828 347 aaKnown RBP9.7□□□□□ -0.86
HERC1-206ENST00000559996 LRIG2O94898 1065 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 ZRANB2O95218 330 aaKnown RBP eCLIP9.7□□□□□ -0.86
HERC1-206ENST00000559996 CKMP06732 381 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 IRF1P10914 325 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 SLC2A3P11169 496 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 AVPR1AP37288 418 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 HCAR3P49019 387 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 SGSHP51688 502 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 RWDD2BP57060 319 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 ZNF211Q13398 564 aaPredicted RBP9.7□□□□□ -0.86
HERC1-206ENST00000559996 SMAD4Q13485 552 aaKnown RBP9.7□□□□□ -0.86
HERC1-206ENST00000559996 AUHQ13825 339 aaKnown RBP9.7□□□□□ -0.86
HERC1-206ENST00000559996 SIX1Q15475 284 aaPredicted RBP9.7□□□□□ -0.86
HERC1-206ENST00000559996 NUGGCQ68CJ6 796 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 RNF43Q68DV7 783 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 FBXL22Q6P050 247 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 PARM1Q6UWI2 310 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 GET4Q7L5D6 327 aaPredicted RBP9.7□□□□□ -0.86
HERC1-206ENST00000559996 VSIG1Q86XK7 387 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 CREG2Q8IUH2 290 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 UNC45BQ8IWX7 931 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 BBS7Q8IWZ6 715 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 RCOR2Q8IZ40 523 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 ADGRG2Q8IZP9 1017 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 ATP6V0D2Q8N8Y2 350 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 PCDH19Q8TAB3 1148 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 HSPH1Q92598 858 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 FGF14Q92915 247 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 SMARCD2Q92925 531 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 WNT2BQ93097 391 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 HLA-CQ95604 372 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 IGSF8Q969P0 613 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 ASIC4Q96FT7 647 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 PSMB7Q99436 277 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 DHX35Q9H5Z1 703 aaKnown RBP9.7□□□□□ -0.86
HERC1-206ENST00000559996 RRAGDQ9NQL2 400 aaPredicted RBP9.7□□□□□ -0.86
HERC1-206ENST00000559996 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.7□□□□□ -0.86
HERC1-206ENST00000559996 ETNK2Q9NVF9 386 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 OBP2AQ9NY56 170 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 DDX56Q9NY93 547 aaKnown RBP9.7□□□□□ -0.86
HERC1-206ENST00000559996 CFAP97Q9P2B7 532 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 EPS15L1Q9UBC2 864 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 NR2E1Q9Y466 385 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 DOCK4Q8N1I0 1966 aa9.7□□□□□ -0.86
HERC1-206ENST00000559996 hCG_1818297A0A087WSY0 165 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 CTAGE9A4FU28 777 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 ZNF487B1APH4 448 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 BHMG1C9JSJ3 638 aaPredicted RBP9.69□□□□□ -0.86
HERC1-206ENST00000559996 ANHXE9PGG2 379 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 CES2O00748 559 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 TRDMT1O14717 391 aaKnown RBP9.69□□□□□ -0.86
HERC1-206ENST00000559996 DCLK1O15075 740 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 CNTN5O94779 1100 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 LATS1O95835 1130 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 MOCS2O96007 188 aaPredicted RBP9.69□□□□□ -0.86
HERC1-206ENST00000559996 KRT10P13645 584 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 GOT1P17174 413 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 TACR2P21452 398 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 AMPD1P23109 780 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 CASQ1P31415 396 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 PTPN7P35236 360 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 GJC1P36383 396 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 SSR1P43307 286 aaKnown RBP9.69□□□□□ -0.86
HERC1-206ENST00000559996 DNA2P51530 1060 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 CDH6P55285 790 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 TFF2Q03403 129 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 KLF1Q13351 362 aaPredicted RBP9.69□□□□□ -0.86
HERC1-206ENST00000559996 DPYSQ14117 519 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 PDK2Q15119 407 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 LLGL1Q15334 1064 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 SMAD2Q15796 467 aaKnown RBP9.69□□□□□ -0.86
HERC1-206ENST00000559996 ALFQ53S48 1182 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 ANKRD20A8PQ5CZ79 823 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 ADGRF1Q5T601 910 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 RAP1GAP2Q684P5 730 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 RFWD3Q6PCD5 774 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 VITQ6UXI7 678 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 SPOCD1Q6ZMY3 1216 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 SND1Q7KZF4 910 aaKnown RBP eCLIP9.69□□□□□ -0.86
HERC1-206ENST00000559996 NLRP14Q86W24 1093 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 CELF5Q8N6W0 485 aaKnown RBP9.69□□□□□ -0.86
HERC1-206ENST00000559996 KIAA1958Q8N8K9 716 aa9.69□□□□□ -0.86
HERC1-206ENST00000559996 KCTD6Q8NC69 237 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms