RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 OSBPL2Q9H1P3 480 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 LINC00597Q9H2U6 94 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 KCNK12Q9HB15 430 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 KLHL11Q9NVR0 708 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 OR12D3Q9UGF7 316 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 XPO7Q9UIA9 1087 aaKnown RBP6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 STOML2Q9UJZ1 356 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 VANGL2Q9ULK5 521 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 SNX10Q9Y5X0 201 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 DOCK6Q96HP0 2047 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 COL6A3P12111 3177 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 ANAPC1Q9H1A4 1944 aa6.82□□□□□ -1.32
CHRNA3-204ENST00000559002 NEDD8-MDP1E9PL57 170 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 PI4K2BG5E9Z4 385 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 I6L893 689 aaPredicted RBP6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 TBL1XO60907 577 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 LRIG2O94898 1065 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 CYP17A1P05093 508 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 ADH5P11766 374 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 ARSAP15289 507 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 EPHB2P29323 1055 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 SLC6A4P31645 630 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 L1CAMP32004 1257 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 HTR7P34969 479 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 MARCKSL1P49006 195 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 NRG1Q02297 640 aaPredicted RBP6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 GAD2Q05329 585 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 PDK2Q15119 407 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 DHCR24Q15392 516 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 ANO4Q32M45 955 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 EML3Q32P44 896 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 ATP13A4Q4VNC1 1196 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 LY6G5CQ5SRR4 150 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 SEL1L2Q5TEA6 688 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 MEI1Q5TIA1 1274 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 FBXL22Q6P050 247 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 TPGS1Q6ZTW0 290 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 CYP4V2Q6ZWL3 525 aaPredicted RBP6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 C14orf80Q86SX3 495 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 FAM217AQ8IXS0 508 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 KATNAL2Q8IYT4 538 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 SLC35F6Q8N357 371 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 SLC44A3Q8N4M1 653 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 DDI1Q8WTU0 396 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 KRT35Q92764 455 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 CD101Q93033 1021 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 BHMTQ93088 406 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 TMA16Q96EY4 203 aaKnown RBP6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 ASIC4Q96FT7 647 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 C1orf74Q96LT6 269 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 FAM83CQ9BQN1 747 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 RPP25Q9BUL9 199 aaKnown RBP6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 BBS2Q9BXC9 721 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 CALN1Q9BXU9 219 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 EBF3Q9H4W6 596 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 CATSPERBQ9H7T0 1116 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 ECT2Q9H8V3 914 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 PCDH18Q9HCL0 1135 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 ANLNQ9NQW6 1124 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 SPHK2Q9NRA0 654 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 STIM2Q9P246 746 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 PACSIN2Q9UNF0 486 aaPredicted RBP6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 JRKLQ9Y4A0 524 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 PCDHA3Q9Y5H8 950 aa6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 NUP210Q8TEM1 1887 aaPredicted RBP6.81□□□□□ -1.32
CHRNA3-204ENST00000559002 DENND4CQ5VZ89 1909 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 DOCK8Q8NF50 2099 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 A0A1B0GVM2 712 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 TCAF2A6NFQ2 919 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 FAM72CH0Y354 149 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 H0Y626 953 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 KCNK3O14649 394 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 FGF10O15520 208 aaPredicted RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 CLDN11O75508 207 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 ZRANB2O95218 330 aaKnown RBP eCLIP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 SRFP11831 508 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 BMP1P13497 986 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 TYRP14679 529 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 RHOQP17081 205 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 GOT1P17174 413 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 KDELR1P24390 212 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 CDH4P55283 916 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 RPS24P62847 133 aaKnown RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 AMPD2Q01433 879 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 PFKPQ01813 784 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 TNK2Q07912 1038 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 SEMA3BQ13214 749 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 ZNF177Q13360 481 aaPredicted RBP6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 TDGQ13569 410 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 CDH18Q13634 790 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 RUNX3Q13761 415 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 DPYSL3Q14195 570 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 ITPRIPL2Q3MIP1 535 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 TJAP1Q5JTD0 557 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 FAM72AQ5TYM5 149 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 MANEALQ5VSG8 457 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 FAM72DQ6L9T8 149 aa6.8□□□□□ -1.32
CHRNA3-204ENST00000559002 RHBDF2Q6PJF5 856 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms