RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 GOLGA6L7A0A1B0GV03 622 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 E5RJQ4 531 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 CAPN9O14815 690 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 DLDP09622 509 aaKnown RBP14.71□□□□□ -0.05
SNX6-210ENST00000557341 POLR2EP19388 210 aaKnown RBP14.71□□□□□ -0.05
SNX6-210ENST00000557341 MAOBP27338 520 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 CD70P32970 193 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 CAMK4Q16566 473 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 PTPRNQ16849 979 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 NADSYN1Q6IA69 706 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 DENND1BQ6P3S1 775 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 BEND5Q7L4P6 421 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 TAC4Q86UU9 113 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 CREBRFQ8IUR6 639 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 ZNF366Q8N895 744 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 ZNF606Q8WXB4 792 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 DNASE2BQ8WZ79 361 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 CRACR2AQ9BSW2 395 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 LHX5Q9H2C1 402 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 DNAAF2Q9NVR5 837 aaKnown RBP14.71□□□□□ -0.05
SNX6-210ENST00000557341 STIM2Q9P246 746 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 APEX2Q9UBZ4 518 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 NAALADL1Q9UQQ1 740 aa14.71□□□□□ -0.05
SNX6-210ENST00000557341 PTPRBP23467 1997 aa14.71□□□□□ -0.06
SNX6-210ENST00000557341 A0A1B0GTW7 788 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 MOCS2O96007 188 aaPredicted RBP14.7□□□□□ -0.06
SNX6-210ENST00000557341 APOEP02649 317 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 GRIK2Q13002 908 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 CDH18Q13634 790 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 DCAF12L1Q5VU92 463 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 GBP6Q6ZN66 633 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 PIP4P1Q86T03 277 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 FAM124AQ86V42 546 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 CCDC117Q8IWD4 279 aaPredicted RBP14.7□□□□□ -0.06
SNX6-210ENST00000557341 ZCCHC9Q8N567 271 aaKnown RBP14.7□□□□□ -0.06
SNX6-210ENST00000557341 OR2I1PQ8NGU4 316 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 ADAM32Q8TC27 787 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 SLC39A13Q96H72 371 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 SLC4A5Q9BY07 1137 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 ZDHHC5Q9C0B5 715 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 NUCKS1Q9H1E3 243 aaKnown RBP14.7□□□□□ -0.06
SNX6-210ENST00000557341 MIR1-1HGQ9H1L0 117 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 PCED1AQ9H1Q7 454 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 POPDC2Q9HBU9 364 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 DOCK4Q8N1I0 1966 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 CFAP47Q6ZTR5 3102 aa14.7□□□□□ -0.06
SNX6-210ENST00000557341 IGF2RP11717 2491 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 GTPBP10A4D1E9 387 aaKnown RBP14.69□□□□□ -0.06
SNX6-210ENST00000557341 METTL12A8MUP2 240 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 PAPSS1O43252 624 aaPredicted RBP14.69□□□□□ -0.06
SNX6-210ENST00000557341 DNTTP04053 509 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 ASLP04424 464 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 C7P10643 843 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 USP8P40818 1118 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 ST8SIA6P61647 398 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 RPS24P62847 133 aaKnown RBP14.69□□□□□ -0.06
SNX6-210ENST00000557341 ZBTB16Q05516 673 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 SLC14A1Q13336 389 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 PDCLQ13371 301 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 ARHGAP44Q17R89 818 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 EXOC3L4Q17RC7 722 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 TTC31Q49AM3 519 aaPredicted RBP14.69□□□□□ -0.06
SNX6-210ENST00000557341 MS4A13Q5J8X5 152 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 SYPL2Q5VXT5 272 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 GJB7Q6PEY0 223 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 TMEM110Q86TL2 294 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 CARNMT1Q8N4J0 409 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 FIBINQ8TAL6 211 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 MED15Q96RN5 788 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 THAP9Q9H5L6 903 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 ACP6Q9NPH0 428 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 CYTH4Q9UIA0 394 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 WASF3Q9UPY6 502 aa14.69□□□□□ -0.06
SNX6-210ENST00000557341 SPAARA0A1B0GVQ0 90 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 BECN2A8MW95 431 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 BCAT2O15382 392 aaPredicted RBP14.68□□□□□ -0.06
SNX6-210ENST00000557341 LUC7L3O95232 432 aaKnown RBP14.68□□□□□ -0.06
SNX6-210ENST00000557341 IGLV3-25P01717 112 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 SLC9A1P19634 815 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 MTIF2P46199 727 aaKnown RBP14.68□□□□□ -0.06
SNX6-210ENST00000557341 YWHAZP63104 245 aaKnown RBP14.68□□□□□ -0.06
SNX6-210ENST00000557341 SIM1P81133 766 aaPredicted RBP14.68□□□□□ -0.06
SNX6-210ENST00000557341 HNRNPDQ14103 355 aaKnown RBP14.68□□□□□ -0.06
SNX6-210ENST00000557341 ZNF776Q68DI1 518 aaPredicted RBP14.68□□□□□ -0.06
SNX6-210ENST00000557341 UNQ6494/PRO21346Q6UXR6 183 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 CHSY1Q86X52 802 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 MLKLQ8NB16 471 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 SHC3Q92529 594 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 SNX19Q92543 992 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 MYEOVQ96EZ4 313 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 LMLNQ96KR4 655 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 BTN2A3PQ96KV6 586 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 ADAM33Q9BZ11 813 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 PRSS16Q9NQE7 514 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 TJP2Q9UDY2 1190 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 SUN2Q9UH99 717 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 ZZEF1O43149 2961 aa14.68□□□□□ -0.06
SNX6-210ENST00000557341 ZFHX4Q86UP3 3567 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 GJB3O75712 270 aa14.67□□□□□ -0.06
SNX6-210ENST00000557341 KRT37O76014 449 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms