RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 RAI2Q9Y5P3 530 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 AK5Q9Y6K8 562 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 KNTC1P50748 2209 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 A0A1W2PPC4 97 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 TK2O00142 265 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 ACTN4O43707 911 aaKnown RBP12.81□□□□□ -0.36
SNX6-209ENST00000557265 TLX3O43711 291 aaPredicted RBP12.81□□□□□ -0.36
SNX6-209ENST00000557265 RFPL3O75679 317 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 C1QL1O75973 258 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 ITGAVP06756 1048 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 POLR2EP19388 210 aaKnown RBP12.81□□□□□ -0.36
SNX6-209ENST00000557265 ABCB4P21439 1286 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 CD70P32970 193 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 HNF1BP35680 557 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 EIF2S3P41091 472 aaKnown RBP12.81□□□□□ -0.36
SNX6-209ENST00000557265 GALCP54803 685 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 TARDBPQ13148 414 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNX6-209ENST00000557265 NUMA1Q14980 2115 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 SHBQ15464 509 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 BSPRYQ5W0U4 402 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 NCEH1Q6PIU2 408 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 LRRC69Q6ZNQ3 347 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 USP30Q70CQ3 517 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 FAM186BQ8IYM0 893 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 TTC39CQ8N584 583 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 SEMA4DQ92854 862 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 SKA1Q96BD8 255 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 CNDP2Q96KP4 475 aaKnown RBP12.81□□□□□ -0.36
SNX6-209ENST00000557265 PRORYQ9H606 182 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 EBF2Q9HAK2 575 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 LRRC4Q9HBW1 653 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 TMEM8AQ9HCN3 771 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 SERGEFQ9UGK8 458 aa12.81□□□□□ -0.36
SNX6-209ENST00000557265 ASH1LQ9NR48 2969 aaKnown RBP12.8□□□□□ -0.36
SNX6-209ENST00000557265 GOLGA6L7A0A1B0GV03 622 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 YJEFN3A6XGL0 299 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 E7ENQ6 273 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 XPO1O14980 1071 aaKnown RBP12.8□□□□□ -0.36
SNX6-209ENST00000557265 ATXN7O15265 892 aaPredicted RBP12.8□□□□□ -0.36
SNX6-209ENST00000557265 MSI1O43347 362 aaKnown RBP12.8□□□□□ -0.36
SNX6-209ENST00000557265 TBL1XO60907 577 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 LATS1O95835 1130 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 WNT1P04628 370 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 C1SP09871 688 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 CDK4P11802 303 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 PSMC2P35998 433 aaKnown RBP12.8□□□□□ -0.36
SNX6-209ENST00000557265 GOLGA7BQ2TAP0 167 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 KRT39Q6A163 491 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 RFWD3Q6PCD5 774 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 EID2Q8N6I1 236 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 WFDC5Q8TCV5 224 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 SAP25Q8TEE9 199 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 TATDN2Q93075 761 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 IPO9Q96P70 1041 aaKnown RBP12.8□□□□□ -0.36
SNX6-209ENST00000557265 NEUROG2Q9H2A3 272 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 AASDHPPTQ9NRN7 309 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 SCML1Q9UN30 329 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 MAPK8IP1Q9UQF2 711 aa12.8□□□□□ -0.36
SNX6-209ENST00000557265 BPTFQ12830 3046 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 A0A1W2PP55 124 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 LRRC72A6NJI9 287 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 K7ELQ4 463 aaPredicted RBP12.79□□□□□ -0.36
SNX6-209ENST00000557265 WNT9AO14904 365 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 MID1O15344 667 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 RRP8O43159 456 aaKnown RBP12.79□□□□□ -0.36
SNX6-209ENST00000557265 RNASEH1O60930 286 aaKnown RBP12.79□□□□□ -0.36
SNX6-209ENST00000557265 SIN3BO75182 1162 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 GTF2H1P32780 548 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 ACADVLP49748 655 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 ST8SIA6P61647 398 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 ENPEPQ07075 957 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 ADIGQ0VDE8 80 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 SFSWAPQ12872 951 aaKnown RBP12.79□□□□□ -0.36
SNX6-209ENST00000557265 ADAM9Q13443 819 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 CST6Q15828 149 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 NFIL3Q16649 462 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 MPP7Q5T2T1 576 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 HES3Q5TGS1 186 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 PIK3R6Q5UE93 754 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 DHX40Q8IX18 779 aaKnown RBP12.79□□□□□ -0.36
SNX6-209ENST00000557265 SIX6OS1Q8N1H7 587 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 TTC17Q96AE7 1141 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 MYO19Q96H55 970 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 FAXDC2Q96IV6 333 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 ABCC13Q9NSE7 274 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 RAB20Q9NX57 234 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 STIM2Q9P246 746 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 TSPAN16Q9UKR8 245 aa12.79□□□□□ -0.36
SNX6-209ENST00000557265 KALRNO60229 2985 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 CKAP5Q14008 2032 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 ZNF462Q96JM2 2506 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 A0A1W2PR77 199 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 RNASEH2AO75792 299 aaKnown RBP12.78□□□□□ -0.36
SNX6-209ENST00000557265 RPL13P26373 211 aaKnown RBP12.78□□□□□ -0.36
SNX6-209ENST00000557265 CD38P28907 300 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 CSKP41240 450 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 SLC11A2P49281 568 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 ARRB1P49407 418 aaPredicted RBP12.78□□□□□ -0.36
SNX6-209ENST00000557265 KCNJ12Q14500 433 aa12.78□□□□□ -0.36
SNX6-209ENST00000557265 RTP5Q14D33 572 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms