RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 DLG2Q15700 870 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 PLEKHG4Q58EX7 1191 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 PPFIBP2Q8ND30 876 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 MFSD3Q96ES6 412 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 SGIP1Q9BQI5 828 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 NME7Q9Y5B8 376 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 TXNDC9O14530 226 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 PHGDHO43175 533 aaKnown RBP15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 DGKIO75912 1065 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 NOS2P35228 1153 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 OR1G1P47890 313 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 FAM110CQ1W6H9 321 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 C1orf146Q5VVC0 180 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 NT5DC4Q86YG4 428 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 SCAMP5Q8TAC9 235 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 DUSP16Q9BY84 665 aa15.76■□□□□ 0.11
TMEM55B-207ENST00000557041 CCDC22O60826 627 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 LTFP02788 710 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 SERPINB6P35237 376 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 THOC5Q13769 683 aaKnown RBP15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 PRPSAP1Q14558 356 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 SLC25A52Q3SY17 297 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 SPRYD7Q5W111 196 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 TDRPQ86YL5 185 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 TRIM42Q8IWZ5 723 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 OR6P1Q8NGX9 317 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 CLPTM1LQ96KA5 538 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 TASP1Q9H6P5 420 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 PPCSQ9HAB8 311 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 VANGL2Q9ULK5 521 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 PSAT1Q9Y617 370 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 SCAMP3O14828 347 aaKnown RBP15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 ATP5HO75947 161 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 VAV1P15498 845 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 UBAP2LQ14157 1087 aaKnown RBP15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 USP10Q14694 798 aaKnown RBP15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 VWA5B1Q5TIE3 1220 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 NCBP2-AS2Q69YL0 99 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 FAM228AQ86W67 206 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 AGGF1Q8N302 714 aaeCLIP15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 APBA2Q99767 749 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 FAM105AQ9NUU6 356 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 FLRT1Q9NZU1 646 aa15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 TSR3Q9UJK0 312 aaKnown RBP15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 ATXN2Q99700 1313 aaKnown RBP15.75■□□□□ 0.11
TMEM55B-207ENST00000557041 E9PBE3 544 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 SPECC1L-ADORA2AF8WAN1 911 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 SMAPO00193 183 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 KLHL41O60662 606 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 GABRB2P47870 512 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 CDC42EP1Q00587 391 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 RCN1Q15293 331 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 ZNF567Q8N184 647 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 PNPLA1Q8N8W4 532 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 SPATA22Q8NHS9 363 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 DENND1AQ8TEH3 1009 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 GTF3C2Q8WUA4 911 aaPredicted RBP15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 KBTBD7Q8WVZ9 684 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 HSFY1Q96LI6 401 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 AGAP2Q99490 1192 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 ADAM2Q99965 735 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 ADAMTS10Q9H324 1103 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 COMMD10Q9Y6G5 202 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 GOLGA4Q13439 2230 aaKnown RBP15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 ZNFX1Q9P2E3 1918 aaKnown RBP15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 GOLGA8CPA6NN73 597 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 GABBR2O75899 941 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 MT-CO1P00395 513 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 NFKB1P19838 968 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 MOGSQ13724 837 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 TNFAIP8L3Q5GJ75 292 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 OTOP3Q7RTS5 596 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 OXNAD1Q96HP4 312 aaPredicted RBP15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 NFKBIZQ9BYH8 718 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 WWP1Q9H0M0 922 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 XPNPEP3Q9NQH7 507 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 MTO1Q9Y2Z2 717 aaKnown RBP15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 SMIM35A0A1B0GVV1 85 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 ZBTB24O43167 697 aaPredicted RBP15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 GPR32O75388 356 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 TSPY1Q01534 308 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 PEX6Q13608 980 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 KPNB1Q14974 876 aaKnown RBP15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 RFWD3Q6PCD5 774 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 SPATA2LQ8IUW3 424 aaPredicted RBP15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 CHRAC1Q9NRG0 131 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 GJD2Q9UKL4 321 aa15.74■□□□□ 0.11
TMEM55B-207ENST00000557041 NUP205Q92621 2012 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 MYADML2A6NDP7 307 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 BUD23O43709 281 aaKnown RBP15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 MGRN1O60291 552 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 CCND1P24385 295 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 ADRA1BP35368 520 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 LDLRAD1Q5T700 205 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 CLEC20AQ6ZU45 233 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 FAM35AQ86V20 835 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 FAM13CQ8NE31 585 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 C10orf82Q8WW14 230 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms