RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 WFIKKN2Q8TEU8 576 aa23.67■■□□□ 1.38
TDP1-216ENST00000556867 XPO4Q9C0E2 1151 aaKnown RBP23.67■■□□□ 1.38
TDP1-216ENST00000556867 HAUS4Q9H6D7 363 aa23.67■■□□□ 1.38
TDP1-216ENST00000556867 PAXBP1Q9Y5B6 917 aa23.67■■□□□ 1.38
TDP1-216ENST00000556867 USP34Q70CQ2 3546 aa23.67■■□□□ 1.38
TDP1-216ENST00000556867 ITIH6Q6UXX5 1313 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 F5H5T6 163 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 NPC1O15118 1278 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 AXIN1O15169 862 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 DEUP1Q05D60 604 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 ACAD10Q6JQN1 1059 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 SND1Q7KZF4 910 aaKnown RBP eCLIP23.66■■□□□ 1.38
TDP1-216ENST00000556867 MFN1Q8IWA4 741 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 CHPFQ8IZ52 775 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 EMC1Q8N766 993 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 WFDC5Q8TCV5 224 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 UCMAQ8WVF2 138 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 CFAP57Q96MR6 1250 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 ACOX2Q99424 681 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 ABCB8Q9NUT2 735 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 ELOVL2Q9NXB9 296 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 ARHGEF38Q9NXL2 777 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 STIM2Q9P246 746 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 GGA2Q9UJY4 613 aa23.66■■□□□ 1.38
TDP1-216ENST00000556867 SPAG17Q6Q759 2223 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 CBFA2T2O43439 604 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 HRO43593 1189 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 TIMM44O43615 452 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 PABPC1P11940 636 aaKnown RBP23.65■■□□□ 1.38
TDP1-216ENST00000556867 KLHL30Q0D2K2 578 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 E2F5Q15329 346 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 TMEM215Q68D42 235 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 ZNF571Q7Z3V5 609 aaPredicted RBP23.65■■□□□ 1.38
TDP1-216ENST00000556867 PHLDB2Q86SQ0 1253 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 CFAP52Q8N1V2 620 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 RNF214Q8ND24 703 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 FIBINQ8TAL6 211 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 SYN2Q92777 582 aaPredicted RBP23.65■■□□□ 1.38
TDP1-216ENST00000556867 LMLNQ96KR4 655 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 GABRG3Q99928 467 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 WDCPQ9H6R7 721 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 POLMQ9NP87 494 aaPredicted RBP23.65■■□□□ 1.38
TDP1-216ENST00000556867 THAP10Q9P2Z0 257 aaPredicted RBP23.65■■□□□ 1.38
TDP1-216ENST00000556867 CAPN11Q9UMQ6 739 aa23.65■■□□□ 1.38
TDP1-216ENST00000556867 TCRBV5S1A1TA0A578 114 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 C2CD4BA6NLJ0 364 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 PAGE1O75459 146 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 ALDH1A2O94788 518 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 LUC7L3O95232 432 aaKnown RBP23.64■■□□□ 1.37
TDP1-216ENST00000556867 ADCY5O95622 1261 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 KRT3P12035 628 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 HOXB2P14652 356 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 RDXP35241 583 aaKnown RBP23.64■■□□□ 1.37
TDP1-216ENST00000556867 ZBED6P86452 979 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 ENPP2Q13822 863 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 TTC39BQ5VTQ0 682 aaPredicted RBP23.64■■□□□ 1.37
TDP1-216ENST00000556867 SDE2Q6IQ49 451 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 ANO7Q6IWH7 933 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 MCOLN2Q8IZK6 566 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 AHI1Q8N157 1196 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 JOSD2Q8TAC2 188 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 RXFP2Q8WXD0 754 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 SELENOOQ9BVL4 669 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 CIPCQ9C0C6 399 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 TKTL2Q9H0I9 626 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 ANLNQ9NQW6 1124 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 CACNA2D2Q9NY47 1150 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 TAS2R14Q9NYV8 317 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 SMG5Q9UPR3 1016 aaKnown RBP23.64■■□□□ 1.37
TDP1-216ENST00000556867 HS3ST4Q9Y661 456 aa23.64■■□□□ 1.37
TDP1-216ENST00000556867 MUC22E2RYF6 1773 aaPredicted RBP23.64■■□□□ 1.37
TDP1-216ENST00000556867 EP300Q09472 2414 aaPredicted RBP23.64■■□□□ 1.37
TDP1-216ENST00000556867 I6L893 689 aaPredicted RBP23.63■■□□□ 1.37
TDP1-216ENST00000556867 ENDOD1O94919 500 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 GJB6O95452 261 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 GYPCP04921 128 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 PDGFRAP16234 1089 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 SDC4P31431 198 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 CD70P32970 193 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 WASP42768 502 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 PTPN9P43378 593 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 SRSF5Q13243 272 aaKnown RBP23.63■■□□□ 1.37
TDP1-216ENST00000556867 CDH18Q13634 790 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 AUHQ13825 339 aaKnown RBP23.63■■□□□ 1.37
TDP1-216ENST00000556867 RABGAP1LQ5R372 815 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 FBXL22Q6P050 247 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 CHST9Q7L1S5 443 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 ADIPOR2Q86V24 386 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 CCDC117Q8IWD4 279 aaPredicted RBP23.63■■□□□ 1.37
TDP1-216ENST00000556867 MDGA1Q8NFP4 955 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 GAB3Q8WWW8 586 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 VCPIP1Q96JH7 1222 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 CD248Q9HCU0 757 aa23.63■■□□□ 1.37
TDP1-216ENST00000556867 PTPRZ1P23471 2315 aaPredicted RBP23.62■■□□□ 1.37
TDP1-216ENST00000556867 CKAP5Q14008 2032 aa23.62■■□□□ 1.37
TDP1-216ENST00000556867 A0A1W2PQF6 199 aa23.62■■□□□ 1.37
TDP1-216ENST00000556867 SIGLEC16A6NMB1 481 aa23.62■■□□□ 1.37
TDP1-216ENST00000556867 DDX3XO00571 662 aaKnown RBP eCLIP23.62■■□□□ 1.375e-8■■□□□ 12.6
TDP1-216ENST00000556867 RFC1P35251 1148 aaPredicted RBP23.62■■□□□ 1.37
TDP1-216ENST00000556867 ATXN1P54253 815 aaKnown RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms