RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ZBTB14O43829 449 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 FYNP06241 537 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 CORO7P57737 925 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 TMEM62Q0P6H9 643 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 IKBKEQ14164 716 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 PKN1Q16512 942 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 USP49Q70CQ1 688 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 EID3Q8N140 333 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 TMEM132CQ8N3T6 1108 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 FAM45AQ8TCE6 357 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 ACER1Q8TDN7 264 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 INPP5DQ92835 1189 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 APOPT1Q96IL0 206 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 FDXACB1Q9BRP7 624 aaPredicted RBP10.96□□□□□ -0.65
ACTN1-216ENST00000556083 SLITRK2Q9H156 845 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 IARS2Q9NSE4 1012 aaKnown RBP10.96□□□□□ -0.65
ACTN1-216ENST00000556083 HEY2Q9UBP5 337 aa10.96□□□□□ -0.65
ACTN1-216ENST00000556083 ERN1O75460 977 aaKnown RBP10.96□□□□□ -0.66
ACTN1-216ENST00000556083 PPIBP23284 216 aaKnown RBP10.96□□□□□ -0.66
ACTN1-216ENST00000556083 TLX1P31314 330 aaPredicted RBP10.96□□□□□ -0.66
ACTN1-216ENST00000556083 KCNJ1P48048 391 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 OTOAQ7RTW8 1153 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 POLNQ7Z5Q5 900 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 MSL3Q8N5Y2 521 aaKnown RBP10.96□□□□□ -0.66
ACTN1-216ENST00000556083 CSGALNACT1Q8TDX6 532 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 TIFAQ96CG3 184 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 ALG13Q9NP73 1137 aaKnown RBP10.96□□□□□ -0.66
ACTN1-216ENST00000556083 TCF7L2Q9NQB0 619 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 TSPAN16Q9UKR8 245 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 RBM47A0AV96 593 aaKnown RBP10.96□□□□□ -0.66
ACTN1-216ENST00000556083 C1QTNF3-AMACRE9PGA6 284 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 UBE2Q2LH0YL09 131 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 CSE1LP55060 971 aaKnown RBP10.96□□□□□ -0.66
ACTN1-216ENST00000556083 MDH1BQ5I0G3 518 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 SH3BP5LQ7L8J4 393 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 OTOP1Q7RTM1 612 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 C16orf62Q7Z3J2 963 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 KCNV2Q8TDN2 545 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 ZFRQ96KR1 1074 aaKnown RBP10.96□□□□□ -0.66
ACTN1-216ENST00000556083 CDC42EP4Q9H3Q1 356 aaKnown RBP10.96□□□□□ -0.66
ACTN1-216ENST00000556083 MARCOQ9UEW3 520 aaPredicted RBP10.96□□□□□ -0.66
ACTN1-216ENST00000556083 SESN1Q9Y6P5 492 aa10.96□□□□□ -0.66
ACTN1-216ENST00000556083 PPRC1Q5VV67 1664 aaKnown RBP10.96□□□□□ -0.66
ACTN1-216ENST00000556083 CYP3A7-CYP3A51PA0A087WV96 503 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 TRIM24O15164 1050 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 AKAP3O75969 853 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 NQO1P15559 274 aaKnown RBP10.95□□□□□ -0.66
ACTN1-216ENST00000556083 CYP3A7P24462 503 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 PLOD1Q02809 727 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-216ENST00000556083 BTG3Q14201 252 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-216ENST00000556083 FAM187BQ17R55 369 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 PPM1LQ5SGD2 360 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 FAM46CQ5VWP2 391 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 LRRC52Q8N7C0 313 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 SPATA17Q96L03 361 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 DEPDC7Q96QD5 511 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 FAIM2Q9BWQ8 316 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 XPNPEP3Q9NQH7 507 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 CROTQ9UKG9 612 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 LRRC10BA6NIK2 292 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 PDHXO00330 501 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 LTFP02788 710 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 HNRNPCP07910 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
ACTN1-216ENST00000556083 ABHD2P08910 425 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 ZNF23P17027 643 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 DRG2P55039 364 aaKnown RBP10.95□□□□□ -0.66
ACTN1-216ENST00000556083 SNRPD1P62314 119 aaKnown RBP10.95□□□□□ -0.66
ACTN1-216ENST00000556083 NR6A1Q15406 480 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 NTRK3Q16288 839 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 RFWD2Q8NHY2 731 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 MYCBPAPQ8TBZ2 947 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 CASKIN2Q8WXE0 1202 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 FAM126AQ9BYI3 521 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-216ENST00000556083 PORCNQ9H237 461 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 EPB41L4BQ9H329 900 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 SEC24DO94855 1032 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-216ENST00000556083 MYBL2P10244 700 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 OGNP20774 298 aaKnown RBP10.95□□□□□ -0.66
ACTN1-216ENST00000556083 POLD2P49005 469 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 CLCN5P51795 746 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 FRG1Q14331 258 aaKnown RBP10.95□□□□□ -0.66
ACTN1-216ENST00000556083 E2F4Q16254 413 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 TXNDC11Q6PKC3 985 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 IKBIPQ70UQ0 350 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 PAGE2Q7Z2X7 111 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 TLK2Q86UE8 772 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 WNT8BQ93098 351 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 L3MBTL3Q96JM7 780 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-216ENST00000556083 C9orf16Q9BUW7 83 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 SEMA6BQ9H3T3 888 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 NT5MQ9NPB1 228 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 SPG21Q9NZD8 308 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 NDUFAF1Q9Y375 327 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 CEP170BQ9Y4F5 1589 aaPredicted RBP10.95□□□□□ -0.66
ACTN1-216ENST00000556083 CNTNAP2Q9UHC6 1331 aa10.95□□□□□ -0.66
ACTN1-216ENST00000556083 FAM237AA0A1B0GTK4 181 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 OR6C75A6NL08 312 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 MLYCDO95822 493 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 TNFRSF8P28908 595 aa10.94□□□□□ -0.66
ACTN1-216ENST00000556083 ATP5C1P36542 298 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms