RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 MACROD2A1Z1Q3 448 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 GRID2IPA4D2P6 1211 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 SHISA7A6NL88 538 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 FAM72CH0Y354 149 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 CYBBP04839 570 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 RARAP10276 462 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 ADH5P11766 374 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 TYRP14679 529 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 HOXC13P31276 330 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 HTR7P34969 479 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 EIF2DP41214 584 aaKnown RBP13.1□□□□□ -0.31
SYNE2-219ENST00000555323 HCAR3P49019 387 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 ARSEP51690 589 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 NAP1L1P55209 391 aaKnown RBP13.1□□□□□ -0.31
SYNE2-219ENST00000555323 TAS2R40P59535 323 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 ZXDAP98168 799 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 PRKCQQ04759 706 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 DPYSL2Q16555 572 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 EFHC2Q5JST6 749 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 FAM72AQ5TYM5 149 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 TTC39BQ5VTQ0 682 aaPredicted RBP13.1□□□□□ -0.31
SYNE2-219ENST00000555323 TXNRD3NBQ6F5E7 133 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 FAM72DQ6L9T8 149 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 C1orf228Q6PIY5 440 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 LRRC31Q6UY01 552 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 TPGS1Q6ZTW0 290 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 DAAM2Q86T65 1068 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 RALGPS2Q86X27 583 aaPredicted RBP13.1□□□□□ -0.31
SYNE2-219ENST00000555323 CHSY1Q86X52 802 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 FAM72BQ86X60 149 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 CPNE8Q86YQ8 564 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 ETFBKMTQ8IXQ9 262 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 SYCE1Q8N0S2 351 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 LGI2Q8N0V4 545 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 HJURPQ8NCD3 748 aaPredicted RBP13.1□□□□□ -0.31
SYNE2-219ENST00000555323 CD101Q93033 1021 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 IGSF8Q969P0 613 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 PRICKLE1Q96MT3 831 aaPredicted RBP13.1□□□□□ -0.31
SYNE2-219ENST00000555323 BBS2Q9BXC9 721 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 SLC2A11Q9BYW1 496 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 VANGL2Q9ULK5 521 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 GUCA1BQ9UMX6 200 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 AP4E1Q9UPM8 1137 aa13.1□□□□□ -0.31
SYNE2-219ENST00000555323 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
SYNE2-219ENST00000555323 TMEM110-MUSTN1A8MSY1 372 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 E9PAM4 449 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 TRDMT1O14717 391 aaKnown RBP13.09□□□□□ -0.31
SYNE2-219ENST00000555323 CACNG3O60359 315 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 LRIG2O94898 1065 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 MOCS3O95396 460 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 VCANP13611 3396 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 HOXD9P28356 352 aaPredicted RBP13.09□□□□□ -0.31
SYNE2-219ENST00000555323 SGSHP51688 502 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 VCPP55072 806 aaKnown RBP13.09□□□□□ -0.31
SYNE2-219ENST00000555323 STARD6P59095 220 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 RPS24P62847 133 aaKnown RBP13.09□□□□□ -0.31
SYNE2-219ENST00000555323 CA9Q16790 459 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 ANO4Q32M45 955 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 KCNT1Q5JUK3 1230 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 RABGAP1LQ5R372 815 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 IER5LQ5T953 404 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 CHST9Q7L1S5 443 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 NT5DC3Q86UY8 548 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 RHOT1Q8IXI2 618 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 PYROXD2Q8N2H3 581 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 ZNF557Q8N988 423 aaPredicted RBP13.09□□□□□ -0.31
SYNE2-219ENST00000555323 DDI1Q8WTU0 396 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 EDAQ92838 391 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 XPO6Q96QU8 1125 aaKnown RBP13.09□□□□□ -0.31
SYNE2-219ENST00000555323 LZTFL1Q9NQ48 299 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 HEBP1Q9NRV9 189 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 ZNF212Q9UDV6 495 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 PYCARDQ9ULZ3 195 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 NEU3Q9UQ49 428 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 SNX10Q9Y5X0 201 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 CAPN6Q9Y6Q1 641 aa13.09□□□□□ -0.31
SYNE2-219ENST00000555323 WASH4PA8MWX3 477 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 NEDD8-MDP1E9PL57 170 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 SPECC1L-ADORA2AF8WAN1 911 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 PSTPIP1O43586 416 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 DCXO43602 365 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 TSPAN3O60637 253 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 TBL1XO60907 577 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 SRGAP2O75044 1071 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 CLDN11O75508 207 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 PALMO75781 387 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 CISD3P0C7P0 127 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 IL4RP24394 825 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 CTHP32929 405 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 OPRD1P41143 372 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 CDH4P55283 916 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 PDK2Q15119 407 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 MLF2Q15773 248 aaPredicted RBP13.08□□□□□ -0.32
SYNE2-219ENST00000555323 ATP13A4Q4VNC1 1196 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 KIAA0907Q7Z7F0 614 aaPredicted RBP13.08□□□□□ -0.32
SYNE2-219ENST00000555323 VSIG1Q86XK7 387 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 CCAR2Q8N163 923 aaKnown RBP13.08□□□□□ -0.32
SYNE2-219ENST00000555323 FIBINQ8TAL6 211 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 TSC1Q92574 1164 aa13.08□□□□□ -0.32
SYNE2-219ENST00000555323 LMLNQ96KR4 655 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms