RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 LCP1P13796 627 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 TBXAS1P24557 533 aaPredicted RBP12.98□□□□□ -0.33
RDH11-207ENST00000554731 CD27P26842 260 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 GRK6P43250 576 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 SLC11A2P49281 568 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 CCT8P50990 548 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 SGSHP51688 502 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 DAOAP59103 153 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 MPP7Q5T2T1 576 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 PIK3R6Q5UE93 754 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 NUGGCQ68CJ6 796 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 RFWD3Q6PCD5 774 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 ADAT2Q7Z6V5 191 aaKnown RBP12.98□□□□□ -0.33
RDH11-207ENST00000554731 UNC45BQ8IWX7 931 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 ZC3H3Q8IXZ2 948 aaKnown RBP12.98□□□□□ -0.33
RDH11-207ENST00000554731 ENGASEQ8NFI3 743 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 WFDC5Q8TCV5 224 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 IGSF8Q969P0 613 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 RMND1Q9NWS8 449 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.98□□□□□ -0.337e-6■■□□□ 11.9
RDH11-207ENST00000554731 BTBD3Q9Y2F9 522 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 ZDHHC9Q9Y397 364 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 ATP6V1DQ9Y5K8 247 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 KNTC1P50748 2209 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 FREM2Q5SZK8 3169 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 IRAK2O43187 625 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 TNFSF14O43557 240 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 PCDHGA12O60330 932 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 IGLV3-27P01718 113 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 PAEPP09466 180 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 CD70P32970 193 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 PRCPP42785 496 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 RGS7P49802 495 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 ST8SIA6P61647 398 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 FKBP3Q00688 224 aaKnown RBP12.97□□□□□ -0.33
RDH11-207ENST00000554731 LRMPQ12912 555 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 PNOCQ13519 176 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 COL28A1Q2UY09 1125 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 INAVAQ3KP66 663 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 PKDCCQ504Y2 493 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 FAM133BQ5BKY9 247 aaKnown RBP12.97□□□□□ -0.33
RDH11-207ENST00000554731 LCLAT1Q6UWP7 414 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 LAYNQ6UX15 382 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 PDZD3Q86UT5 571 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 MFN1Q8IWA4 741 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 GALNT15Q8N3T1 639 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 UBR7Q8N806 425 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 HJURPQ8NCD3 748 aaPredicted RBP12.97□□□□□ -0.33
RDH11-207ENST00000554731 GANCQ8TET4 914 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 IRGQQ8WZA9 623 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 DDX50Q9BQ39 737 aaKnown RBP12.97□□□□□ -0.33
RDH11-207ENST00000554731 STIM2Q9P246 746 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 ARMCX3Q9UH62 379 aaPredicted RBP12.97□□□□□ -0.33
RDH11-207ENST00000554731 SCML1Q9UN30 329 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 NCKAP1Q9Y2A7 1128 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 RAXQ9Y2V3 346 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 ADAMTS20P59510 1910 aa12.97□□□□□ -0.33
RDH11-207ENST00000554731 WDFY3Q8IZQ1 3526 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 PTPRBP23467 1997 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 GOLGA6L7A0A1B0GV03 622 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 TYW5A2RUC4 315 aaKnown RBP12.96□□□□□ -0.33
RDH11-207ENST00000554731 H0Y8X5 98 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 KCNK3O14649 394 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 DFNA5O60443 496 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 ACSL4O60488 711 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 RNASEH1O60930 286 aaKnown RBP12.96□□□□□ -0.33
RDH11-207ENST00000554731 LTFP02788 710 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 ASLP04424 464 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 SLC6A4P31645 630 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 CTSKP43235 329 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 C21orf59P57076 290 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 TBX4P57082 545 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 SFSWAPQ12872 951 aaKnown RBP12.96□□□□□ -0.33
RDH11-207ENST00000554731 STILQ15468 1287 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 COBLL1Q53SF7 1204 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 KIAA0895LQ68EN5 471 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 PMF1Q6P1K2 205 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 TMEM270Q6UE05 265 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 USP30Q70CQ3 517 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 FIBINQ8TAL6 211 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 SLC35F5Q8WV83 523 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 TFAP2BQ92481 460 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 SLC35C1Q96A29 364 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 AZIN2Q96A70 460 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 TTC17Q96AE7 1141 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 RSPH9Q9H1X1 276 aaPredicted RBP12.96□□□□□ -0.33
RDH11-207ENST00000554731 PABPC3Q9H361 631 aaKnown RBP12.96□□□□□ -0.33
RDH11-207ENST00000554731 MTG2Q9H4K7 406 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 DKK4Q9UBT3 224 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 PCDHB4Q9Y5E5 795 aa12.96□□□□□ -0.33
RDH11-207ENST00000554731 MUC22E2RYF6 1773 aaPredicted RBP12.96□□□□□ -0.34
RDH11-207ENST00000554731 ASXL3Q9C0F0 2248 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 FAM47DPA6NHR8 397 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 M0QYV0 167 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 PIK3R2O00459 728 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 GABBR2O75899 941 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 FBXO21O94952 628 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 CSKP41240 450 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 RACK1P63244 317 aaKnown RBP12.95□□□□□ -0.34
RDH11-207ENST00000554731 LRRC63Q05C16 580 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms