RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ZNF513Q8N8E2 541 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-214ENST00000554604 TERB1Q8NA31 727 aa12.94□□□□□ -0.34
SHMT2-214ENST00000554604 IL17RCQ8NAC3 791 aa12.94□□□□□ -0.34
SHMT2-214ENST00000554604 TXNDC5Q8NBS9 432 aaKnown RBP12.94□□□□□ -0.34
SHMT2-214ENST00000554604 MSANTD4Q8NCY6 345 aa12.94□□□□□ -0.34
SHMT2-214ENST00000554604 OLIG1Q8TAK6 271 aa12.94□□□□□ -0.34
SHMT2-214ENST00000554604 EDEM1Q92611 657 aa12.94□□□□□ -0.34
SHMT2-214ENST00000554604 FAM81BQ96LP2 452 aa12.94□□□□□ -0.34
SHMT2-214ENST00000554604 ABCC13Q9NSE7 274 aa12.94□□□□□ -0.34
SHMT2-214ENST00000554604 MARK1Q9P0L2 795 aa12.94□□□□□ -0.34
SHMT2-214ENST00000554604 EBF1Q9UH73 591 aa12.94□□□□□ -0.34
SHMT2-214ENST00000554604 HYOU1Q9Y4L1 999 aa12.94□□□□□ -0.34
SHMT2-214ENST00000554604 PI4KAP42356 2102 aa12.94□□□□□ -0.34
SHMT2-214ENST00000554604 DCHS1Q96JQ0 3298 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 ANTXRLA6NF34 631 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 PIK3R2O00459 728 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 MED7O43513 233 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 LRP3O75074 770 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 KLKB1P03952 638 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 CYBBP04839 570 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 USP8P40818 1118 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 KIR2DL1P43626 348 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-214ENST00000554604 HARS2P49590 506 aaKnown RBP12.93□□□□□ -0.34
SHMT2-214ENST00000554604 DGKGP49619 791 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 ZNF132P52740 706 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 DAOAP59103 153 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 ARHGAP44Q17R89 818 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 USP39Q53GS9 565 aaKnown RBP12.93□□□□□ -0.34
SHMT2-214ENST00000554604 PMF1Q6P1K2 205 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 KBTBD6Q86V97 674 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 PHTF2Q8N3S3 785 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 KCNV2Q8TDN2 545 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 SLC35F5Q8WV83 523 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 PLD4Q96BZ4 506 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 ZSWIM1Q9BR11 485 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 PACSIN1Q9BY11 444 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 POLMQ9NP87 494 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-214ENST00000554604 ZDHHC4Q9NPG8 344 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 ST7Q9NRC1 585 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 PLK2Q9NYY3 685 aa12.93□□□□□ -0.34
SHMT2-214ENST00000554604 CNOT1A5YKK6 2376 aaKnown RBP12.93□□□□□ -0.34
SHMT2-214ENST00000554604 CACNA1AO00555 2505 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 SGK1O00141 431 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 FOXN3O00409 490 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-214ENST00000554604 TRIM24O15164 1050 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 THAP12O43422 761 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 BUB1O43683 1085 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 FBXO21O94952 628 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 TMEM253P0C7T8 217 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 PNMA6AP0CW24 399 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-214ENST00000554604 TNFAIP3P21580 790 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 GBP1P32455 592 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 CLCN6P51797 869 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 LMNB2Q03252 620 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 BRD3Q15059 726 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 SDE2Q6IQ49 451 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 BHLHA9Q7RTU4 235 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 SCML4Q8N228 414 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 PGBD3Q8N328 593 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 IRGQQ8WZA9 623 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 HSFY1Q96LI6 401 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 OSBPL9Q96SU4 736 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 AGPAT1Q99943 283 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 TPSD1Q9BZJ3 242 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 MIS12Q9H081 205 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 BCCIPQ9P287 314 aaKnown RBP eCLIP12.92□□□□□ -0.34
SHMT2-214ENST00000554604 RNF14Q9UBS8 474 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 SFMBT1Q9UHJ3 866 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 AGO1Q9UL18 857 aaKnown RBP12.92□□□□□ -0.34
SHMT2-214ENST00000554604 RAB21Q9UL25 225 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 CNTN6Q9UQ52 1028 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 HBS1LQ9Y450 684 aaKnown RBP12.92□□□□□ -0.34
SHMT2-214ENST00000554604 PLXND1Q9Y4D7 1925 aa12.92□□□□□ -0.34
SHMT2-214ENST00000554604 PRR5-ARHGAP8B1AHC4 643 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 ZBTB24O43167 697 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-214ENST00000554604 ATP8B1O43520 1251 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 SRGAP2O75044 1071 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 PALMO75781 387 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 LTFP02788 710 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 SDHBP21912 280 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 GNA15P30679 374 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 NTSR1P30989 418 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 NAP1L1P55209 391 aaKnown RBP12.91□□□□□ -0.34
SHMT2-214ENST00000554604 ARHGAP8P85298 464 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 MEI1Q5TIA1 1274 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 CREG2Q8IUH2 290 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 FAM71AQ8IYT1 594 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 CHPFQ8IZ52 775 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 MDGA1Q8NFP4 955 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 DDI1Q8WTU0 396 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 HMGB4Q8WW32 186 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 SHC3Q92529 594 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 RMDN1Q96DB5 314 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 LOXL4Q96JB6 756 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 CALR3Q96L12 384 aaKnown RBP12.91□□□□□ -0.34
SHMT2-214ENST00000554604 TLR10Q9BXR5 811 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 PARD6BQ9BYG5 372 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 ANKZF1Q9H8Y5 726 aa12.91□□□□□ -0.34
SHMT2-214ENST00000554604 PARD6AQ9NPB6 346 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms