RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 LRCH2Q5VUJ6 765 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 CREB3L3Q68CJ9 461 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 PLA2G4FQ68DD2 849 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 APOA5Q6Q788 366 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 KANSL1Q7Z3B3 1105 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 DGLUCYQ7Z3D6 616 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 HEATR3Q7Z4Q2 680 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 CATIPQ7Z7H3 387 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 CDR2LQ86X02 465 aaPredicted RBP3.53□□□□□ -1.84
SLIRP-202ENST00000553981 MICU3Q86XE3 530 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 TICAM2Q86XR7 235 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 COLGALT2Q8IYK4 626 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 LRRC43Q8N309 656 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 METTL13Q8N6R0 699 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 KIAA1958Q8N8K9 716 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 RNF169Q8NCN4 708 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 BEND2Q8NDZ0 799 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 RRP36Q96EU6 259 aaKnown RBP3.53□□□□□ -1.84
SLIRP-202ENST00000553981 AIFM3Q96NN9 605 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 BBC3Q96PG8 261 aaPredicted RBP3.53□□□□□ -1.84
SLIRP-202ENST00000553981 SOX7Q9BT81 388 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 DDX23Q9BUQ8 820 aaKnown RBP3.53□□□□□ -1.84
SLIRP-202ENST00000553981 EIF2AQ9BY44 585 aaKnown RBP3.53□□□□□ -1.84
SLIRP-202ENST00000553981 OSBPL6Q9BZF3 934 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 ENKD1Q9H0I2 346 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 TOR3AQ9H497 397 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 SYNPO2LQ9H987 977 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 TBC1D17Q9HA65 648 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 MAN1C1Q9NR34 630 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 RXFP3Q9NSD7 469 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 ING3Q9NXR8 418 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 HES2Q9Y543 173 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 NUMBLQ9Y6R0 609 aa3.53□□□□□ -1.84
SLIRP-202ENST00000553981 MIA3Q5JRA6 1907 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 GPR179Q6PRD1 2367 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 CENPVL1A0A0U1RR11 272 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 ANTXRLA6NF34 631 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 AHRRA9YTQ3 701 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 M0QZ92 97 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 MASP2O00187 686 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 IPO5O00410 1097 aaKnown RBP3.52□□□□□ -1.85
SLIRP-202ENST00000553981 PLD2O14939 933 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 INPPL1O15357 1258 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 HOXA3O43365 443 aaPredicted RBP3.52□□□□□ -1.85
SLIRP-202ENST00000553981 TGM5O43548 720 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 PSMD10O75832 226 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 RECQL4O94761 1208 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 PRPF6O94906 941 aaKnown RBP3.52□□□□□ -1.85
SLIRP-202ENST00000553981 TDP2O95551 362 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 TOP3BO95985 862 aaKnown RBP3.52□□□□□ -1.85
SLIRP-202ENST00000553981 POMCP01189 267 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 LAMP2P13473 410 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 CIITAP33076 1130 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 CA8P35219 290 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 IGFALSP35858 605 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 LIFRP42702 1097 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 NT5C2P49902 561 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 STARD6P59095 220 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 PRKCEQ02156 737 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 ADCY2Q08462 1091 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 DSC1Q08554 894 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 SRSF5Q13243 272 aaKnown RBP3.52□□□□□ -1.85
SLIRP-202ENST00000553981 ZNF174Q15697 407 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 NAB2Q15742 525 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 NOMO2Q5JPE7 1267 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 ATAT1Q5SQI0 421 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 ESRP1Q6NXG1 681 aaKnown RBP3.52□□□□□ -1.85
SLIRP-202ENST00000553981 PRSS55Q6UWB4 352 aaPredicted RBP3.52□□□□□ -1.85
SLIRP-202ENST00000553981 OLFML1Q6UWY5 402 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 UNQ6494/PRO21346Q6UXR6 183 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 Q6YL49 198 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 ANO5Q75V66 913 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 MRPL10Q7Z7H8 261 aaKnown RBP3.52□□□□□ -1.85
SLIRP-202ENST00000553981 PALB2Q86YC2 1186 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 ZBTB44Q8NCP5 570 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 PJA1Q8NG27 643 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 CTCFLQ8NI51 663 aaPredicted RBP3.52□□□□□ -1.85
SLIRP-202ENST00000553981 ITFG1Q8TB96 612 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 CUL5Q93034 780 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 PPP2R3CQ969Q6 453 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 CPB2Q96IY4 423 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 CDHR1Q96JP9 859 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 MBOAT7Q96N66 472 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 CLUHP3Q96NS8 147 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 NECTIN4Q96NY8 510 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 SRPK1Q96SB4 655 aaKnown RBP3.52□□□□□ -1.85
SLIRP-202ENST00000553981 SDF4Q9BRK5 362 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 HERC2P3Q9BVR0 1158 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 NT5C3AQ9H0P0 336 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 MTG2Q9H4K7 406 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 AZI2Q9H6S1 392 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 WDR6Q9NNW5 1121 aaKnown RBP3.52□□□□□ -1.85
SLIRP-202ENST00000553981 XPNPEP1Q9NQW7 623 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 GJB4Q9NTQ9 266 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 HCFC1R1Q9NWW0 138 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 BARHL2Q9NY43 387 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 EPS15L1Q9UBC2 864 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 WNT16Q9UBV4 365 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 PRG3Q9Y2Y8 225 aaPredicted RBP3.52□□□□□ -1.85
SLIRP-202ENST00000553981 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms