RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 TRIM58Q8NG06 486 aa17.77■□□□□ 0.44
ITGA5-213ENST00000553071 ASIC4Q96FT7 647 aa17.77■□□□□ 0.44
ITGA5-213ENST00000553071 DHX35Q9H5Z1 703 aaKnown RBP17.77■□□□□ 0.44
ITGA5-213ENST00000553071 ZWILCHQ9H900 591 aa17.77■□□□□ 0.44
ITGA5-213ENST00000553071 GTSE1Q9NYZ3 720 aa17.77■□□□□ 0.44
ITGA5-213ENST00000553071 XPO7Q9UIA9 1087 aaKnown RBP17.77■□□□□ 0.44
ITGA5-213ENST00000553071 FBXL21Q9UKT6 434 aa17.77■□□□□ 0.44
ITGA5-213ENST00000553071 AMFRQ9UKV5 643 aa17.77■□□□□ 0.44
ITGA5-213ENST00000553071 SPTBN5Q9NRC6 3674 aaKnown RBP17.76■□□□□ 0.43
ITGA5-213ENST00000553071 IGLV3-10A0A075B6K4 115 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 GOLGA6L7A0A1B0GV03 622 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 DRGXA6NNA5 263 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 MIF4GDA9UHW6 222 aaKnown RBP17.76■□□□□ 0.43
ITGA5-213ENST00000553071 E9PAM4 449 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 CLDN11O75508 207 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 RARAP10276 462 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 TYRP14679 529 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 SLC6A4P31645 630 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 ARL4AP40617 200 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 SLC25A11Q02978 314 aaKnown RBP17.76■□□□□ 0.43
ITGA5-213ENST00000553071 TNK2Q07912 1038 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 E2F5Q15329 346 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 DPYSL2Q16555 572 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 RAB6CQ53S08 254 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 RFWD3Q6PCD5 774 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 CHST9Q7L1S5 443 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 PEX26Q7Z412 305 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 CCDC26Q8TAB7 109 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 TBC1D31Q96DN5 1066 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 SNRNP25Q9BV90 132 aaKnown RBP17.76■□□□□ 0.43
ITGA5-213ENST00000553071 ZYG11BQ9C0D3 744 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 RAB6CQ9H0N0 254 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 CATSPERBQ9H7T0 1116 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 PRDM16Q9HAZ2 1276 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 RCOR3Q9P2K3 495 aaPredicted RBP17.76■□□□□ 0.43
ITGA5-213ENST00000553071 VANGL2Q9ULK5 521 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 MRPS17Q9Y2R5 130 aaKnown RBP17.76■□□□□ 0.43
ITGA5-213ENST00000553071 MYO10Q9HD67 2058 aa17.76■□□□□ 0.43
ITGA5-213ENST00000553071 HELZP42694 1942 aaKnown RBP17.76■□□□□ 0.43
ITGA5-213ENST00000553071 A0A1B0GVM2 712 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 CCDC66A2RUB6 948 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 TCAF2A6NFQ2 919 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 NEDD8-MDP1E9PL57 170 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 H3BRJ5 948 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 FGF10O15520 208 aaPredicted RBP17.75■□□□□ 0.43
ITGA5-213ENST00000553071 DCXO43602 365 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 NARSO43776 548 aaKnown RBP17.75■□□□□ 0.43
ITGA5-213ENST00000553071 CACNG3O60359 315 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 TSPAN3O60637 253 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 TBL1XO60907 577 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 SRGAP2O75044 1071 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 PALMO75781 387 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 MOCS3O95396 460 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 GJA4P35212 333 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 CETN2P41208 172 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 CDH4P55283 916 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 KRT81Q14533 505 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 FYB2Q5VWT5 728 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 VSIG1Q86XK7 387 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 UBL4BQ8N7F7 174 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 LRRC57Q8N9N7 239 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 KCTD6Q8NC69 237 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 NELL2Q99435 816 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 CD320Q9NPF0 282 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 ANLNQ9NQW6 1124 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 KCND1Q9NSA2 647 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.75■□□□□ 0.43
ITGA5-213ENST00000553071 DEC1Q9P2X7 70 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 TRIM10Q9UDY6 481 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 MUTYHQ9UIF7 546 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.75■□□□□ 0.43
ITGA5-213ENST00000553071 PIAS3Q9Y6X2 628 aa17.75■□□□□ 0.43
ITGA5-213ENST00000553071 TCF20Q9UGU0 1960 aaKnown RBP17.74■□□□□ 0.43
ITGA5-213ENST00000553071 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.74■□□□□ 0.43
ITGA5-213ENST00000553071 GRID2IPA4D2P6 1211 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 H0Y626 953 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 I6L893 689 aaPredicted RBP17.74■□□□□ 0.43
ITGA5-213ENST00000553071 DAPK3O43293 454 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 KIF5CO60282 957 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 LRIG2O94898 1065 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 RHOQP17081 205 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 IL1R2P27930 398 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 EPHB2P29323 1055 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 ZXDAP98168 799 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 ZNF177Q13360 481 aaPredicted RBP17.74■□□□□ 0.43
ITGA5-213ENST00000553071 SLC12A1Q13621 1099 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 MLF2Q15773 248 aaPredicted RBP17.74■□□□□ 0.43
ITGA5-213ENST00000553071 KCNT1Q5JUK3 1230 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 RWDD4Q6NW29 188 aaKnown RBP17.74■□□□□ 0.43
ITGA5-213ENST00000553071 ZNF852Q6ZMS4 543 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 HSPH1Q92598 858 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 EDAQ92838 391 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 PEBP4Q96S96 227 aa17.74■□□□□ 0.43
ITGA5-213ENST00000553071 ZNF487B1APH4 448 aa17.73■□□□□ 0.43
ITGA5-213ENST00000553071 SPECC1L-ADORA2AF8WAN1 911 aa17.73■□□□□ 0.43
ITGA5-213ENST00000553071 EEF2KO00418 725 aaKnown RBP17.73■□□□□ 0.43
ITGA5-213ENST00000553071 TRDMT1O14717 391 aaKnown RBP17.73■□□□□ 0.43
ITGA5-213ENST00000553071 CREB3O43889 395 aa17.73■□□□□ 0.43
ITGA5-213ENST00000553071 CTHP32929 405 aa17.73■□□□□ 0.43
ITGA5-213ENST00000553071 VCPP55072 806 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms