RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 A0A1B0GVT2 93 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 YJEFN3A6XGL0 299 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 E7ENQ6 273 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 TSPAN3O60637 253 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 HLA-EP13747 358 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 ACSL1P33121 698 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 CSNK1EP49674 416 aaKnown RBP12.34□□□□□ -0.43
CKAP4-202ENST00000552828 BCAT1P54687 386 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 ARID5AQ03989 594 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 SUZ12Q15022 739 aaKnown RBP12.34□□□□□ -0.43
CKAP4-202ENST00000552828 ACAP1Q15027 740 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 TPD52L1Q16890 204 aaPredicted RBP12.34□□□□□ -0.43
CKAP4-202ENST00000552828 KIF19Q2TAC6 998 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 MPP7Q5T2T1 576 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 BSPRYQ5W0U4 402 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 NDRG1Q92597 394 aaKnown RBP12.34□□□□□ -0.43
CKAP4-202ENST00000552828 TMA16Q96EY4 203 aaKnown RBP12.34□□□□□ -0.43
CKAP4-202ENST00000552828 TSPAN16Q9UKR8 245 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 KIAA1257Q9ULG3 409 aa12.34□□□□□ -0.43
CKAP4-202ENST00000552828 APC2O95996 2303 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 MYH10P35580 1976 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 PCDHGA12O60330 932 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 DLDP09622 509 aaKnown RBP12.33□□□□□ -0.44
CKAP4-202ENST00000552828 ATXN1LP0C7T5 689 aaKnown RBP12.33□□□□□ -0.44
CKAP4-202ENST00000552828 GRIA4P48058 902 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 RPS14P62263 151 aaKnown RBP12.33□□□□□ -0.44
CKAP4-202ENST00000552828 BST2Q10589 180 aaKnown RBP12.33□□□□□ -0.44
CKAP4-202ENST00000552828 CUL2Q13617 745 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 GOLGA7BQ2TAP0 167 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 CBWD6Q4V339 395 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 PKDCCQ504Y2 493 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 FNDC3BQ53EP0 1204 aaKnown RBP12.33□□□□□ -0.44
CKAP4-202ENST00000552828 SGO2Q562F6 1265 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 CBWD3Q5JTY5 395 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 CBWD5Q5RIA9 395 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 CAVIN1Q6NZI2 390 aaKnown RBP12.33□□□□□ -0.44
CKAP4-202ENST00000552828 CHST9Q7L1S5 443 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 FAM124AQ86V42 546 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 CACUL1Q86Y37 369 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 AHI1Q8N157 1196 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 UBR7Q8N806 425 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 RHBDD1Q8TEB9 315 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 RNF139Q8WU17 664 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 CYB5D2Q8WUJ1 264 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 SLC35C1Q96A29 364 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 AZIN2Q96A70 460 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 LMLNQ96KR4 655 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 MED15Q96RN5 788 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 ORAI3Q9BRQ5 295 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 BTBD1Q9H0C5 482 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 LRRC4Q9HBW1 653 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 SGK2Q9HBY8 427 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 TM9SF3Q9HD45 589 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 PRSS16Q9NQE7 514 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 CNGB3Q9NQW8 809 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 ABCC13Q9NSE7 274 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 ABCB8Q9NUT2 735 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 ANO10Q9NW15 660 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 TMEM63CQ9P1W3 806 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 SFMBT1Q9UHJ3 866 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 GGA2Q9UJY4 613 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 ANKRD6Q9Y2G4 727 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 SNX11Q9Y5W9 270 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 CKAP5Q14008 2032 aa12.33□□□□□ -0.44
CKAP4-202ENST00000552828 O00370 1275 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 IRAK2O43187 625 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 PAPSS1O43252 624 aaPredicted RBP12.32□□□□□ -0.44
CKAP4-202ENST00000552828 SEMA4FO95754 770 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 IGLV3-27P01718 113 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 ATP5BP06576 529 aaKnown RBP12.32□□□□□ -0.44
CKAP4-202ENST00000552828 SETSIPP0DME0 302 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 PABPC1P11940 636 aaKnown RBP12.32□□□□□ -0.44
CKAP4-202ENST00000552828 CD27P26842 260 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 MARSP56192 900 aaKnown RBP12.32□□□□□ -0.44
CKAP4-202ENST00000552828 ADIGQ0VDE8 80 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 CETN1Q12798 172 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 TEAD4Q15561 434 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 STX1AQ16623 288 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 KLHL40Q2TBA0 621 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 PIK3R6Q5UE93 754 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 MBLAC2Q68D91 279 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 MSANTD2Q6P1R3 559 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 CREBRFQ8IUR6 639 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 ZNF557Q8N988 423 aaPredicted RBP12.32□□□□□ -0.44
CKAP4-202ENST00000552828 MDM1Q8TC05 714 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 EDEM1Q92611 657 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 GOLGA1Q92805 767 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 IGSF8Q969P0 613 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 BIRC7Q96CA5 298 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 SCUBE2Q9NQ36 999 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 HESX1Q9UBX0 185 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 SUN2Q9UH99 717 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 BTBD3Q9Y2F9 522 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 ACACAQ13085 2346 aa12.32□□□□□ -0.44
CKAP4-202ENST00000552828 GCN1Q92616 2671 aaKnown RBP12.32□□□□□ -0.44
CKAP4-202ENST00000552828 KNL1Q8NG31 2342 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 C10orf142B7Z368 130 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 MSI1O43347 362 aaKnown RBP12.31□□□□□ -0.44
CKAP4-202ENST00000552828 TNFSF14O43557 240 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 GABBR2O75899 941 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms