RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 KAT6BQ8WYB5 2073 aa5.92□□□□□ -1.46
CPSF6-206ENST00000550987 SMG6Q86US8 1419 aaKnown RBP5.91□□□□□ -1.46
CPSF6-206ENST00000550987 TRGV11A0A075B6L2 103 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 FAM90A18PA6NE21 464 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 FAM90A16PA6NEW6 464 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 FAM90A9PA6NNJ1 464 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 FAM90A5PA8MXJ8 464 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 B4E171 279 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 ADM5C9JUS6 153 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 AGPSO00116 658 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 EXOC5O00471 708 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 SEPT4O43236 478 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 RNASEH2AO75792 299 aaKnown RBP5.91□□□□□ -1.46
CPSF6-206ENST00000550987 FAM90A15PP0C7V4 464 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 FAM90A14PP0C7W9 464 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 FOSL2P15408 326 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 CAPN3P20807 821 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 ACO1P21399 889 aaKnown RBP5.91□□□□□ -1.46
CPSF6-206ENST00000550987 DRD1P21728 446 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 TSPAN7P41732 249 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 SCNN1GP51170 649 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 SEC24CP53992 1094 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 RNASELQ05823 741 aaKnown RBP5.91□□□□□ -1.46
CPSF6-206ENST00000550987 PDCLQ13371 301 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 BFSP2Q13515 415 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 GEN1Q17RS7 908 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 TRIM60Q495X7 471 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 CTXN3Q4LDR2 81 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 TMEM196Q5HYL7 178 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 UBXN11Q5T124 520 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 TTC22Q5TAA0 569 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 MAP3K21Q5TCX8 1036 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 ATG16L1Q676U5 607 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 SLC9A4Q6AI14 798 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 MCTP1Q6DN14 999 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 CFAP161Q6P656 301 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 DSTYKQ6XUX3 929 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 SYNE3Q6ZMZ3 975 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 TMPRSS9Q7Z410 1059 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 LIMS2Q7Z4I7 341 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 ANKS1BQ7Z6G8 1248 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 TBC1D1Q86TI0 1168 aaPredicted RBP5.91□□□□□ -1.46
CPSF6-206ENST00000550987 TRABD2AQ86V40 505 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 RAB11FIP4Q86YS3 637 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 ZNF808Q8N4W9 903 aaPredicted RBP5.91□□□□□ -1.46
CPSF6-206ENST00000550987 TSPYL6Q8N831 410 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 Q8NA96 180 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 B3GALNT2Q8NCR0 500 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 STAMQ92783 540 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 REXO5Q96IC2 774 aaKnown RBP5.91□□□□□ -1.46
CPSF6-206ENST00000550987 VPS50Q96JG6 964 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 TWNKQ96RR1 684 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 HAPLN3Q96S86 360 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 GPR20Q99678 358 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 VN1R3Q9BXE9 311 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 TEX101Q9BY14 249 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 ALOXE3Q9BYJ1 711 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 G6PC2Q9NQR9 355 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 FBXO28Q9NVF7 368 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 INTS13Q9NVM9 706 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 TMEM160Q9NX00 188 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 PI4KBQ9UBF8 816 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 AASSQ9UDR5 926 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 VPS51Q9UID3 782 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 DRG1Q9Y295 367 aaKnown RBP5.91□□□□□ -1.46
CPSF6-206ENST00000550987 RABGAP1Q9Y3P9 1069 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 LAS1LQ9Y4W2 734 aaKnown RBP5.91□□□□□ -1.46
CPSF6-206ENST00000550987 BPTFQ12830 3046 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 C4BP0C0L5 1744 aa5.91□□□□□ -1.46
CPSF6-206ENST00000550987 DNAH12Q6ZR08 3092 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 STX16-NPEPL1H3BU86 382 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 RNASET2O00584 256 aaKnown RBP5.9□□□□□ -1.46
CPSF6-206ENST00000550987 STX16O14662 325 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 TRIM24O15164 1050 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 PPM1DO15297 605 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 TSPAN3O60637 253 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 CELF2O95319 508 aaKnown RBP5.9□□□□□ -1.46
CPSF6-206ENST00000550987 TFRCP02786 760 aaKnown RBP5.9□□□□□ -1.46
CPSF6-206ENST00000550987 CFIP05156 583 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 ELANEP08246 267 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 TMEM225BP0DP42 221 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 GATA3P23771 443 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 MAGEA10P43363 369 aaPredicted RBP5.9□□□□□ -1.46
CPSF6-206ENST00000550987 MCM2P49736 904 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 CCR5P51681 352 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 NR1H2P55055 460 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 NAP1L1P55209 391 aaKnown RBP5.9□□□□□ -1.46
CPSF6-206ENST00000550987 TIRAPP58753 221 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 TIAL1Q01085 375 aaKnown RBP eCLIP5.9□□□□□ -1.46
CPSF6-206ENST00000550987 SEMA3BQ13214 749 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 SMAD1Q15797 465 aaKnown RBP5.9□□□□□ -1.46
CPSF6-206ENST00000550987 TBRG1Q3YBR2 411 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 GALNTL6Q49A17 601 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 TBC1D10BQ4KMP7 808 aaPredicted RBP5.9□□□□□ -1.46
CPSF6-206ENST00000550987 ITPRIPL1Q6GPH6 555 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 OGFOD2Q6N063 350 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 MAMDC4Q6UXC1 1216 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 P3H2Q8IVL5 708 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 ANKRD44Q8N8A2 993 aa5.9□□□□□ -1.46
CPSF6-206ENST00000550987 FSIP1Q8NA03 581 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms