RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 BRI3BPQ8WY22 251 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 DCDC2Q9UHG0 476 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 AHDC1Q5TGY3 1603 aaPredicted RBP15.37■□□□□ 0.05
CUX1-214ENST00000550008 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.37■□□□□ 0.05
CUX1-214ENST00000550008 AP3B1O00203 1094 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 OR1E1P30953 314 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 ASPAP45381 313 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 COPAP53621 1224 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 WNT7BP56706 349 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 ZNF177Q13360 481 aaPredicted RBP15.37■□□□□ 0.05
CUX1-214ENST00000550008 CDH18Q13634 790 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 DDR2Q16832 855 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 FUKQ8N0W3 1084 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 GALNT4Q8N4A0 578 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 STKLD1Q8NE28 680 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 CALML6Q8TD86 181 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 GPAMQ9HCL2 828 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 SLC8A2Q9UPR5 921 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 MSI1O43347 362 aaKnown RBP15.37■□□□□ 0.05
CUX1-214ENST00000550008 KLHL2O95198 593 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 SLC2A3P11169 496 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 MATKP42679 507 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 DNAL1Q4LDG9 190 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 ANKRD20A4Q4UJ75 823 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 CCNJLQ8IV13 435 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 LRRC52Q8N7C0 313 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 MPP6Q9NZW5 540 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 CDYLQ9Y232 598 aa15.37■□□□□ 0.05
CUX1-214ENST00000550008 ERI2A8K979 691 aaKnown RBP15.36■□□□□ 0.05
CUX1-214ENST00000550008 PRKAR2AP13861 404 aaKnown RBP15.36■□□□□ 0.05
CUX1-214ENST00000550008 OGDHQ02218 1023 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 CDH17Q12864 832 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 CA9Q16790 459 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 PTRHD1Q6GMV3 140 aaKnown RBP15.36■□□□□ 0.05
CUX1-214ENST00000550008 CRELD2Q6UXH1 353 aaPredicted RBP15.36■□□□□ 0.05
CUX1-214ENST00000550008 UNC5AQ6ZN44 842 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 CYP4X1Q8N118 509 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 SPATA6LQ8N4H0 392 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 CMTM5Q96DZ9 223 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 P2RY11Q96G91 374 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 PCYT2Q99447 389 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 ACSS3Q9H6R3 686 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 CD274Q9NZQ7 290 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 PACSIN3Q9UKS6 424 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 SNX10Q9Y5X0 201 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 TPP1O14773 563 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 SLC11A2P49281 568 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 CRYBB1P53674 252 aaPredicted RBP15.36■□□□□ 0.05
CUX1-214ENST00000550008 ARHGAP1Q07960 439 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 LBRQ14739 615 aaKnown RBP15.36■□□□□ 0.05
CUX1-214ENST00000550008 FAM35AQ86V20 835 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 TNS4Q8IZW8 715 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 TSPAN17Q96FV3 270 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 KCNK16Q96T55 309 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 AKT1P31749 480 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 MRPS5P82675 430 aaKnown RBP15.36■□□□□ 0.05
CUX1-214ENST00000550008 MTFR1Q15390 333 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 SLC1A5Q15758 541 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 CMC1Q7Z7K0 106 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 CSPG4P5Q96PW8 444 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 OLA1Q9NTK5 396 aaKnown RBP15.36■□□□□ 0.05
CUX1-214ENST00000550008 C2orf71A6NGG8 1288 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 RAMP2O60895 175 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 KCNA3P22001 575 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 WEE1P30291 646 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 CARNMT1Q8N4J0 409 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 GPR88Q9GZN0 384 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 DSEQ9UL01 958 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 CRYL1Q9Y2S2 319 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 PCDHB5Q9Y5E4 795 aa15.36■□□□□ 0.05
CUX1-214ENST00000550008 MYH1P12882 1939 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 TRDMT1O14717 391 aaKnown RBP15.35■□□□□ 0.05
CUX1-214ENST00000550008 CHADO15335 359 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 MBL2P11226 248 aaPredicted RBP15.35■□□□□ 0.05
CUX1-214ENST00000550008 NNMTP40261 264 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 BST1Q10588 318 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 MAP7Q14244 749 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 NOMO1Q15155 1222 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 SPDYCQ5MJ68 293 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 SPDYAQ5MJ70 313 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 CCDC185Q8N715 623 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 ZBTB18Q99592 522 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 TRIM4Q9C037 500 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 FBXO6Q9NRD1 293 aaPredicted RBP15.35■□□□□ 0.05
CUX1-214ENST00000550008 ZDHHC18Q9NUE0 388 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 CCDC88AQ3V6T2 1871 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 ANGPT2O15123 496 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 TFE3P19532 575 aaPredicted RBP15.35■□□□□ 0.05
CUX1-214ENST00000550008 CCL23P55773 120 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 ZC3H3Q8IXZ2 948 aaKnown RBP15.35■□□□□ 0.05
CUX1-214ENST00000550008 DNAJC9Q8WXX5 260 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 ZNF670Q9BS34 389 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 SH3BP1Q9Y3L3 701 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 SLC4A7Q9Y6M7 1214 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 UBR2Q8IWV8 1755 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 C4BP0C0L5 1744 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 A8MX80 341 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 UBTFL6P0CB48 400 aaPredicted RBP15.35■□□□□ 0.05
CUX1-214ENST00000550008 CDC25CP30307 473 aa15.35■□□□□ 0.05
CUX1-214ENST00000550008 SLC1A6P48664 564 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms