RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CLIC3O95833 236 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 TRUB2O95900 331 aaKnown RBP15.06■□□□□ 0
HOXC11-202ENST00000546378 ASS1P00966 412 aaKnown RBP15.06■□□□□ 0
HOXC11-202ENST00000546378 GPD1P21695 349 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 GJA5P36382 358 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 CSE1LP55060 971 aaKnown RBP15.06■□□□□ 0
HOXC11-202ENST00000546378 INHBCP55103 352 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 FBXL19Q6PCT2 694 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 RNF111Q6ZNA4 994 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 ZBTB8OSQ8IWT0 167 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 ZNF276Q8N554 614 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 PLD5Q8N7P1 536 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 BHLHE22Q8NFJ8 381 aaPredicted RBP15.06■□□□□ 0
HOXC11-202ENST00000546378 NKD2Q969F2 451 aaPredicted RBP15.06■□□□□ 0
HOXC11-202ENST00000546378 RCN3Q96D15 328 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 CXCL16Q9H2A7 254 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 TASP1Q9H6P5 420 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 MINDY3Q9H8M7 445 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 CDH22Q9UJ99 828 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 POMPQ9Y244 141 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 SSX2IPQ9Y2D8 614 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 SNX13Q9Y5W8 968 aa15.06■□□□□ 0
HOXC11-202ENST00000546378 A0A088AWK7 358 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 FAM149AA5PLN7 773 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 TK2O00142 265 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 RFPL1O75677 317 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 CYP2F1P24903 491 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 ETV4P43268 484 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 ACTR3P61158 418 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 OCRLQ01968 901 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 HSDL1Q3SXM5 330 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 JADE1Q6IE81 842 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 ZNF280DQ6N043 979 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 XYLT1Q86Y38 959 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 MAP7D3Q8IWC1 876 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 CPNE9Q8IYJ1 553 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 TTC13Q8NBP0 860 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 OR52K1Q8NGK4 314 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 ZC3H15Q8WU90 426 aaKnown RBP15.05■□□□□ 0
HOXC11-202ENST00000546378 ALKBH8Q96BT7 664 aaKnown RBP15.05■□□□□ 0
HOXC11-202ENST00000546378 PORCNQ9H237 461 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 PDP2Q9P2J9 529 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 ARHGAP28Q9P2N2 729 aa15.05■□□□□ 0
HOXC11-202ENST00000546378 SIGLEC16A6NMB1 481 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 LTFP02788 710 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 BPGMP07738 259 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 FAM200BP0CF97 657 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 NR4A1P22736 598 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 ACAT1P24752 427 aaKnown RBP15.05■□□□□ -0
HOXC11-202ENST00000546378 PSMB4P28070 264 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 PSMD7P51665 324 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 SNAPC2Q13487 334 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 B3GNT9Q6UX72 402 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 CAND1Q86VP6 1230 aaKnown RBP15.05■□□□□ -0
HOXC11-202ENST00000546378 MYO1HQ8N1T3 1032 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 SAMD3Q8N6K7 520 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 PQLC3Q8N755 202 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 PCDH19Q8TAB3 1148 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 HSPBAP1Q96EW2 488 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 CELF6Q96J87 481 aaKnown RBP15.05■□□□□ -0
HOXC11-202ENST00000546378 COG4Q9H9E3 785 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 XPNPEP3Q9NQH7 507 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 GMPR2Q9P2T1 348 aaKnown RBP15.05■□□□□ -0
HOXC11-202ENST00000546378 SNX10Q9Y5X0 201 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 SLC15A5A6NIM6 579 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 CCDC130P13994 396 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 HNRNPLP14866 589 aaKnown RBP eCLIP15.05■□□□□ -0
HOXC11-202ENST00000546378 NAGLUP54802 743 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 SLC12A1Q13621 1099 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 DNAL1Q4LDG9 190 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 SLFN12LQ6IEE8 588 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 KRT80Q6KB66 452 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 C12orf56Q8IXR9 622 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 RNF169Q8NCN4 708 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 GATA6Q92908 595 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 PPP2R3CQ969Q6 453 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 RBPJLQ9UBG7 517 aa15.05■□□□□ -0
HOXC11-202ENST00000546378 BRCA1P38398 1863 aaKnown RBP15.04■□□□□ -0
HOXC11-202ENST00000546378 LACTBL1A8MY62 500 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 H3BSA7 217 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 KCNA2P16389 499 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 ALDH1A3P47895 512 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 PITX1P78337 314 aaPredicted RBP15.04■□□□□ -0
HOXC11-202ENST00000546378 LAMTOR4Q0VGL1 99 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 SEPT6Q14141 434 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 PRPSAP1Q14558 356 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 DCAF6Q58WW2 860 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 ATF7IP2Q5U623 682 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 SLC9A4Q6AI14 798 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 TRNP1Q6NT89 227 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 ATG14Q6ZNE5 492 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 STRA8Q7Z7C7 330 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 ACVR1CQ8NER5 493 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 MAPK15Q8TD08 544 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 HPDLQ96IR7 371 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 MRPL4Q9BYD3 311 aaKnown RBP15.04■□□□□ -0
HOXC11-202ENST00000546378 SIK2Q9H0K1 926 aa15.04■□□□□ -0
HOXC11-202ENST00000546378 SUDS3Q9H7L9 328 aaPredicted RBP15.04■□□□□ -0
HOXC11-202ENST00000546378 GBA2Q9HCG7 927 aaPredicted RBP15.04■□□□□ -0
HOXC11-202ENST00000546378 TEX264Q9Y6I9 313 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms