RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 FZD10Q9ULW2 581 aa15.71■□□□□ 0.11
CNN3-207ENST00000545882 SOX13Q9UN79 622 aa15.71■□□□□ 0.11
CNN3-207ENST00000545882 COL1A2P08123 1366 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 ITGA2BP08514 1039 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 DESP17661 470 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 PGAM1P18669 254 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 LMO2P25791 158 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 SCNN1AP37088 669 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 IDH3AP50213 366 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 BST2Q10589 180 aaKnown RBP15.7■□□□□ 0.1
CNN3-207ENST00000545882 ZRSR2Q15696 482 aaKnown RBP15.7■□□□□ 0.1
CNN3-207ENST00000545882 SMAD1Q15797 465 aaKnown RBP15.7■□□□□ 0.1
CNN3-207ENST00000545882 OTUD1Q5VV17 481 aaPredicted RBP15.7■□□□□ 0.1
CNN3-207ENST00000545882 C1orf146Q5VVC0 180 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 RNF111Q6ZNA4 994 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 EP400NLQ6ZTU2 488 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 ARMCX2Q7L311 632 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 UNC93AQ86WB7 457 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 POU5F2Q8N7G0 328 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 ANKRD52Q8NB46 1076 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 GSTCDQ8NEC7 633 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 KBTBD7Q8WVZ9 684 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 CDCA5Q96FF9 252 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 SNX27Q96L92 541 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 PGLYRP2Q96PD5 576 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 MROH8Q9H579 483 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 EIF2B3Q9NR50 452 aaKnown RBP15.7■□□□□ 0.1
CNN3-207ENST00000545882 DNAJB4Q9UDY4 337 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 DCDC2Q9UHG0 476 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 SIN3BO75182 1162 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 SERPINE1P05121 402 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 PDGFRBP09619 1106 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 ALOX15P16050 662 aaPredicted RBP15.7■□□□□ 0.1
CNN3-207ENST00000545882 CRABP2P29373 138 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 HOXA11P31270 313 aaPredicted RBP15.7■□□□□ 0.1
CNN3-207ENST00000545882 CACNA2D1P54289 1103 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 SNX16P57768 344 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 PITX1P78337 314 aaPredicted RBP15.7■□□□□ 0.1
CNN3-207ENST00000545882 LAMC2Q13753 1193 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 RALGPS1Q5JS13 557 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 C6orf163Q5TEZ5 329 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 STRADAQ7RTN6 431 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 FAM131BQ86XD5 332 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 OR6Y1Q8NGX8 325 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 NDRG1Q92597 394 aaKnown RBP15.7■□□□□ 0.1
CNN3-207ENST00000545882 P2RY11Q96G91 374 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 EIF2AQ9BY44 585 aaKnown RBP15.7■□□□□ 0.1
CNN3-207ENST00000545882 VCXQ9H320 206 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 STN1Q9H668 368 aaKnown RBP15.7■□□□□ 0.1
CNN3-207ENST00000545882 ZNF358Q9NW07 568 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 SCOCQ9UIL1 159 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 DERAQ9Y315 318 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 PLXNB2O15031 1838 aa15.7■□□□□ 0.1
CNN3-207ENST00000545882 MAGEA13PA6NCF6 341 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 RNF103O00237 685 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 PPP1R12AO14974 1030 aaPredicted RBP15.69■□□□□ 0.1
CNN3-207ENST00000545882 SORBS2O94875 1100 aaKnown RBP15.69■□□□□ 0.1
CNN3-207ENST00000545882 FESP07332 822 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 CHRM1P11229 460 aaPredicted RBP15.69■□□□□ 0.1
CNN3-207ENST00000545882 PSMB4P28070 264 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 AP2B1P63010 937 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 OLIG2Q13516 323 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 GLRA4Q5JXX5 417 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 ZNF618Q5T7W0 954 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 PGM2L1Q6PCE3 622 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 CES3Q6UWW8 571 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 IZUMO2Q6UXV1 221 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 RSPH3Q86UC2 560 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 TP53INP2Q8IXH6 220 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 CRYBG2Q8N1P7 616 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 OPTNQ96CV9 577 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 FCRL3Q96P31 734 aaPredicted RBP15.69■□□□□ 0.1
CNN3-207ENST00000545882 TTC1Q99614 292 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 ECSITQ9BQ95 431 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 PLEKHA5Q9HAU0 1116 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 DNAJC28Q9NX36 388 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.69■□□□□ 0.1
CNN3-207ENST00000545882 HES2Q9Y543 173 aa15.69■□□□□ 0.1
CNN3-207ENST00000545882 KLHL2O95198 593 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 ERVK-10P10266 1014 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 CYP2C8P10632 490 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 MLH1P40692 756 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 GLUD2P49448 558 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 HARS2P49590 506 aaKnown RBP15.68■□□□□ 0.1
CNN3-207ENST00000545882 BCAT1P54687 386 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 NAB1Q13506 487 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 INSCQ1MX18 579 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 THEMIS2Q5TEJ8 643 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 VWA5B1Q5TIE3 1220 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 C9orf57Q5W0N0 161 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 FASTKD5Q7L8L6 764 aaKnown RBP15.68■□□□□ 0.1
CNN3-207ENST00000545882 HACE1Q8IYU2 909 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 DEFB106AQ8N104 65 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 ZNF567Q8N184 647 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 LRRC52Q8N7C0 313 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 SHCBP1Q8NEM2 672 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 SPDYE1Q8NFV5 336 aaPredicted RBP15.68■□□□□ 0.1
CNN3-207ENST00000545882 CDKL2Q92772 493 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 GORASP1Q9BQQ3 440 aa15.68■□□□□ 0.1
CNN3-207ENST00000545882 S100A14Q9HCY8 104 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms