RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 ARHGEF38Q9NXL2 777 aa22.55■■□□□ 1.2
OTUB1-212ENST00000543988 VPS13AQ96RL7 3174 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 GPR179Q6PRD1 2367 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 TYW5A2RUC4 315 aaKnown RBP22.54■■□□□ 1.2
OTUB1-212ENST00000543988 F5H5T6 163 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 F9P00740 461 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 KRT3P12035 628 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 PDGFRAP16234 1089 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 RRM1P23921 792 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 SDC4P31431 198 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 CASP14P31944 242 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 RDXP35241 583 aaKnown RBP22.54■■□□□ 1.2
OTUB1-212ENST00000543988 RFC1P35251 1148 aaPredicted RBP22.54■■□□□ 1.2
OTUB1-212ENST00000543988 WASP42768 502 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 CRY1Q16526 586 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 CCDC14Q49A88 953 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 RAB6CQ53S08 254 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 BRMS1LQ5PSV4 323 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 TMEM215Q68D42 235 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 SPECC1LQ69YQ0 1117 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 TRMT11Q7Z4G4 463 aaKnown RBP22.54■■□□□ 1.2
OTUB1-212ENST00000543988 LONP2Q86WA8 852 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 DNAAF5Q86Y56 855 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 VSTM4Q8IW00 320 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 MFN1Q8IWA4 741 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 CAMKK1Q8N5S9 505 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.54■■□□□ 1.2
OTUB1-212ENST00000543988 TSTD1Q8NFU3 115 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 SELENOOQ9BVL4 669 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 TKTL2Q9H0I9 626 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 RAB6CQ9H0N0 254 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 GGA2Q9UJY4 613 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.54■■□□□ 1.23e-6■□□□□ 9.5
OTUB1-212ENST00000543988 HS3ST4Q9Y661 456 aa22.54■■□□□ 1.2
OTUB1-212ENST00000543988 CD70P32970 193 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 PTPN9P43378 593 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 DGKEP52429 567 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 MTA1Q13330 715 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 AUHQ13825 339 aaKnown RBP22.53■■□□□ 1.2
OTUB1-212ENST00000543988 EIF4HQ15056 248 aaKnown RBP22.53■■□□□ 1.2
OTUB1-212ENST00000543988 CDO1Q16878 200 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 C15orf59Q2T9L4 293 aaPredicted RBP22.53■■□□□ 1.2
OTUB1-212ENST00000543988 SH3PXD2AQ5TCZ1 1133 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 PPP1R2P3Q6NXS1 205 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 FBXL22Q6P050 247 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 WDR5BQ86VZ2 330 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 CIR1Q86X95 450 aaPredicted RBP22.53■■□□□ 1.2
OTUB1-212ENST00000543988 FAM131BQ86XD5 332 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 CHPFQ8IZ52 775 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 CARNMT1Q8N4J0 409 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 SORCS1Q8WY21 1168 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 NKD2Q969F2 451 aaPredicted RBP22.53■■□□□ 1.2
OTUB1-212ENST00000543988 CIPCQ9C0C6 399 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 WDCPQ9H6R7 721 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 TMPRSS4Q9NRS4 437 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 ELOVL2Q9NXB9 296 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 CACNA2D2Q9NY47 1150 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 PAXBP1Q9Y5B6 917 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 SNX10Q9Y5X0 201 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 ATG2BQ96BY7 2078 aa22.53■■□□□ 1.2
OTUB1-212ENST00000543988 SIGLEC16A6NMB1 481 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 AP5Z1O43299 807 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 ATMINO43313 823 aaPredicted RBP22.52■■□□□ 1.2
OTUB1-212ENST00000543988 ENDOD1O94919 500 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 LUC7L3O95232 432 aaKnown RBP22.52■■□□□ 1.2
OTUB1-212ENST00000543988 SERPING1P05155 500 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 PLEKP08567 350 aaPredicted RBP22.52■■□□□ 1.2
OTUB1-212ENST00000543988 PABPC1P11940 636 aaKnown RBP22.52■■□□□ 1.2
OTUB1-212ENST00000543988 NTSR1P30989 418 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 IRAK1P51617 712 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 SRSF5Q13243 272 aaKnown RBP22.52■■□□□ 1.2
OTUB1-212ENST00000543988 CDH18Q13634 790 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 PPP1R15BQ5SWA1 713 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 WDR59Q6PJI9 974 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 C14orf80Q86SX3 495 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 WFIKKN2Q8TEU8 576 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 LMLNQ96KR4 655 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 MCEEQ96PE7 176 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 SIK2Q9H0K1 926 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 VANGL2Q9ULK5 521 aa22.52■■□□□ 1.2
OTUB1-212ENST00000543988 MYO15AQ9UKN7 3530 aa22.52■■□□□ 1.19
OTUB1-212ENST00000543988 GZMAP12544 262 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 HOXB2P14652 356 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 GPD1P21695 349 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 RPL7AP62424 266 aaKnown RBP22.51■■□□□ 1.19
OTUB1-212ENST00000543988 LMAN2Q12907 356 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 FUT11Q495W5 492 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 FSCBQ5H9T9 825 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 RABGAP1LQ5R372 815 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 ANO7Q6IWH7 933 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 SARM1Q6SZW1 724 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 CHST9Q7L1S5 443 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 ASCL5Q7RTU5 278 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 KIAA0907Q7Z7F0 614 aaPredicted RBP22.51■■□□□ 1.19
OTUB1-212ENST00000543988 ADIPOR2Q86V24 386 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 AHI1Q8N157 1196 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 ZNF557Q8N988 423 aaPredicted RBP22.51■■□□□ 1.19
OTUB1-212ENST00000543988 FIBINQ8TAL6 211 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 IGSF8Q969P0 613 aa22.51■■□□□ 1.19
OTUB1-212ENST00000543988 VCPIP1Q96JH7 1222 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms