RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 LRP12Q9Y561 859 aa4.45□□□□□ -1.7
PRKDC-210ENST00000541488 OR2W5A6NFC9 320 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 RHODO00212 210 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 CER1O95813 267 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 ITGA5P08648 1049 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 EEF1GP26641 437 aaKnown RBP4.44□□□□□ -1.7
PRKDC-210ENST00000541488 CDC25AP30304 524 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 HOXA11P31270 313 aaPredicted RBP4.44□□□□□ -1.7
PRKDC-210ENST00000541488 SLC37A1P57057 533 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 CSHL1Q14406 222 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 GRM4Q14833 912 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 DLGAP5Q15398 846 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 C6orf10Q5SRN2 563 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 LVRNQ6Q4G3 990 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 KIAA1191Q96A73 305 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 THOC3Q96J01 351 aaKnown RBP4.44□□□□□ -1.7
PRKDC-210ENST00000541488 ZNF347Q96SE7 839 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 HTATIP2Q9BUP3 242 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 COLEC11Q9BWP8 271 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 OSBPL5Q9H0X9 879 aaPredicted RBP4.44□□□□□ -1.7
PRKDC-210ENST00000541488 FNIP2Q9P278 1114 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 RAB21Q9UL25 225 aa4.44□□□□□ -1.7
PRKDC-210ENST00000541488 KIR2DS5A0A0G2JLQ3 304 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 FAM90A8PA6NJQ4 464 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 KIR2DS3K7RE56 304 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 PIP5K1BO14986 540 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 PRPF4O43172 522 aaKnown RBP eCLIP4.43□□□□□ -1.75e-6■□□□□ 11.3
PRKDC-210ENST00000541488 SMAD6O43541 496 aaKnown RBP4.43□□□□□ -1.7
PRKDC-210ENST00000541488 FGF18O76093 207 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 CNTN5O94779 1100 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 NFATC1O95644 943 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 FAM90A13PP0C7W8 464 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 FAM90A24PP0C7X0 464 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 TRIM27P14373 513 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 KLRK1P26718 216 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 AKT1P31749 480 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 P2RX3P56373 397 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 ZNF585BQ52M93 769 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 GLE1Q53GS7 698 aaKnown RBP4.43□□□□□ -1.7
PRKDC-210ENST00000541488 ZNF474Q6S9Z5 364 aaPredicted RBP4.43□□□□□ -1.7
PRKDC-210ENST00000541488 DDIASQ8IXT1 998 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 PJA1Q8NG27 643 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 ZFPM2Q8WW38 1151 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 LYZL4Q96KX0 146 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 NUDT22Q9BRQ3 303 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 ZPBPQ9BS86 351 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 CERS4Q9HA82 394 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 LAMP3Q9UQV4 416 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 INSL5Q9Y5Q6 135 aa4.43□□□□□ -1.7
PRKDC-210ENST00000541488 CXorf65A6NEN9 183 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 GTPBP1O00178 669 aaKnown RBP4.42□□□□□ -1.7
PRKDC-210ENST00000541488 PCDH17O14917 1159 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 DHHO43323 396 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 ATG13O75143 517 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 PPP6R2O75170 966 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 WNT1P04628 370 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 KRT10P13645 584 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 RNASELQ05823 741 aaKnown RBP4.42□□□□□ -1.7
PRKDC-210ENST00000541488 ERV3-1Q14264 604 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 RAB30Q15771 203 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 MPEG1Q2M385 716 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 PIK3CD-AS1Q5SR53 167 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 IL31Q6EBC2 164 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 LRIG3Q6UXM1 1119 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 TRAPPC11Q7Z392 1133 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 OR2C3Q8N628 320 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 SRFBP1Q8NEF9 429 aaKnown RBP4.42□□□□□ -1.7
PRKDC-210ENST00000541488 TMEM174Q8WUU8 243 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 KAT2AQ92830 837 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 ZNF419Q96HQ0 510 aaPredicted RBP4.42□□□□□ -1.7
PRKDC-210ENST00000541488 FBXO4Q9UKT5 387 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 PROCRQ9UNN8 238 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 UBE2J1Q9Y385 318 aaPredicted RBP4.42□□□□□ -1.7
PRKDC-210ENST00000541488 DTNAQ9Y4J8 743 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 SPATA31A5Q5VU36 1347 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 SPATA31A7Q8IWB4 1347 aa4.42□□□□□ -1.7
PRKDC-210ENST00000541488 LACTBL1A8MY62 500 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 RASA4BC9J798 803 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 TNFRSF13BO14836 293 aaPredicted RBP4.41□□□□□ -1.7
PRKDC-210ENST00000541488 RASA4O43374 803 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 ALDOCP09972 364 aaKnown RBP4.41□□□□□ -1.7
PRKDC-210ENST00000541488 NBPF7P0C2Y1 421 aaPredicted RBP4.41□□□□□ -1.7
PRKDC-210ENST00000541488 T-ENOLP0DO92 83 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 HOXB2P14652 356 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 ABCB4P21439 1286 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 HSPA7P48741 367 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 NEK3P51956 506 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 ARL13AQ5H913 290 aaPredicted RBP4.41□□□□□ -1.7
PRKDC-210ENST00000541488 KIAA1755Q5JYT7 1200 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 WDR93Q6P2C0 686 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 B4GALNT2Q8NHY0 566 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 OIT3Q8WWZ8 545 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 IP6K1Q92551 441 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 MUL1Q969V5 352 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 FAR2Q96K12 515 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 C8orf48Q96LL4 319 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 EIF2AQ9BY44 585 aaKnown RBP4.41□□□□□ -1.7
PRKDC-210ENST00000541488 RBM38Q9H0Z9 239 aaKnown RBP4.41□□□□□ -1.7
PRKDC-210ENST00000541488 RXFP3Q9NSD7 469 aa4.41□□□□□ -1.7
PRKDC-210ENST00000541488 TRPC5Q9UL62 973 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms