RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 IL12RB1P42701 662 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 PPP3CCP48454 512 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 TAF6P49848 677 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 CSRP3P50461 194 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 CDR1P51861 262 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 SLC7A9P82251 487 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 ZXDBP98169 803 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 ATP2C1P98194 919 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-214ENST00000540865 BNC1Q01954 994 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 SEMG2Q02383 582 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 TLE3Q04726 772 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 GAD2Q05329 585 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 KDSRQ06136 332 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 MPP2Q14168 576 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 MAP7Q14244 749 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 RTP5Q14D33 572 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 INAVAQ3KP66 663 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 CFAP221Q4G0U5 840 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 BMP2KLQ5H9B9 411 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 SDHAF4Q5VUM1 108 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 WSCD1Q658N2 575 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 SDE2Q6IQ49 451 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 DHRS13Q6UX07 377 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 RUFY3Q7L099 469 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 REC114Q7Z4M0 266 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 ZCCHC9Q8N567 271 aaKnown RBP4.91□□□□□ -1.62
SNHG1-214ENST00000540865 TMEM161BQ8NDZ6 487 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 STKLD1Q8NE28 680 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 IPO4Q8TEX9 1081 aaKnown RBP4.91□□□□□ -1.62
SNHG1-214ENST00000540865 WASF1Q92558 559 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 FGF11Q92914 225 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 OTUB2Q96DC9 234 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 FUBP3Q96I24 572 aaKnown RBP eCLIP4.91□□□□□ -1.62
SNHG1-214ENST00000540865 CEP295NLQ96MC4 621 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 GABRG3Q99928 467 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 DPH2Q9BQC3 489 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-214ENST00000540865 ACBD6Q9BR61 282 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 PYM1Q9BRP8 204 aaKnown RBP4.91□□□□□ -1.62
SNHG1-214ENST00000540865 TIPINQ9BVW5 301 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 WNT10AQ9GZT5 417 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 RPF1Q9H9Y2 349 aaKnown RBP4.91□□□□□ -1.62
SNHG1-214ENST00000540865 ZDHHC4Q9NPG8 344 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 GJB4Q9NTQ9 266 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 TMLHEQ9NVH6 421 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 TRPM5Q9NZQ8 1165 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 TBC1D14Q9P2M4 693 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 DEC1Q9P2X7 70 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.91□□□□□ -1.62
SNHG1-214ENST00000540865 BTBD3Q9Y2F9 522 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 PCDHGA1Q9Y5H4 931 aa4.91□□□□□ -1.62
SNHG1-214ENST00000540865 KIF26AQ9ULI4 1882 aaPredicted RBP4.91□□□□□ -1.62
SNHG1-214ENST00000540865 KNL1Q8NG31 2342 aa4.9□□□□□ -1.62
SNHG1-214ENST00000540865 ANKRD17O75179 2603 aaKnown RBP4.9□□□□□ -1.62
SNHG1-214ENST00000540865 E2F8A0AVK6 867 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 BTBD18B2RXH4 712 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 H0YCG3 227 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 OGTO15294 1046 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 SLC28A2O43868 658 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 PCDHGA12O60330 932 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 LEFTY1O75610 366 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 OLFM2O95897 454 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 IGLV1-40P01703 118 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 F13BP05160 661 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 C1SP09871 688 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 NCAM1P13591 858 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 PLS3P13797 630 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 SCP2P22307 547 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 CYP2F1P24903 491 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 OXTRP30559 389 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 CCT6AP40227 531 aaKnown RBP4.9□□□□□ -1.63
SNHG1-214ENST00000540865 TNFSF9P41273 254 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 WASP42768 502 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 MATR3P43243 847 aaKnown RBP eCLIP4.9□□□□□ -1.63
SNHG1-214ENST00000540865 MAGEA11P43364 429 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 IRAK1P51617 712 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 UCNP55089 124 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 CXADRP78310 365 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 MYO1EQ12965 1108 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 MAPK7Q13164 816 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 STK3Q13188 491 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 ORC2Q13416 577 aaPredicted RBP4.9□□□□□ -1.63
SNHG1-214ENST00000540865 PDIA5Q14554 519 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 TMEM132DQ14C87 1099 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 SV2CQ496J9 727 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 LY6G5CQ5SRR4 150 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 C10orf76Q5T2E6 689 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 BTBD8Q5XKL5 378 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 JADE1Q6IE81 842 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 C1orf186Q6ZWK4 172 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 DDX42Q86XP3 938 aaKnown RBP eCLIP4.9□□□□□ -1.637e-6■■■□□ 16.5
SNHG1-214ENST00000540865 MIB1Q86YT6 1006 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 FMNL3Q8IVF7 1028 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 SPACA3Q8IXA5 215 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 CHPFQ8IZ52 775 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 TERB1Q8NA31 727 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 ZNF507Q8TCN5 953 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 KCNN1Q92952 543 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 TOE1Q96GM8 510 aaKnown RBP4.9□□□□□ -1.63
SNHG1-214ENST00000540865 TMEM176AQ96HP8 235 aa4.9□□□□□ -1.63
SNHG1-214ENST00000540865 SPATA17Q96L03 361 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms