RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 CTXN3Q4LDR2 81 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 ANKRD20A8PQ5CZ79 823 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 CLEC20AQ6ZU45 233 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 BZW1Q7L1Q6 419 aaKnown RBP12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 GET4Q7L5D6 327 aaPredicted RBP12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 BMP8AQ7Z5Y6 402 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 ZNF461Q8TAF7 563 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 TLCD1Q96CP7 247 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 FAM122AQ96E09 287 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 SMARCD1Q96GM5 515 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 SERPINB12Q96P63 405 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 TMEM121Q9BTD3 319 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 SNRNP25Q9BV90 132 aaKnown RBP12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 CDC42EP4Q9H3Q1 356 aaKnown RBP12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 SMOC2Q9H3U7 446 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 KCNK12Q9HB15 430 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 CNGB3Q9NQW8 809 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 BCCIPQ9P287 314 aaKnown RBP eCLIP12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 RCOR3Q9P2K3 495 aaPredicted RBP12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 MYO10Q9HD67 2058 aa12.36□□□□□ -0.43
CYB561A3-215ENST00000540317 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 M0QZQ0 153 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 PRRG1O14668 218 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 EIF3HO15372 352 aaKnown RBP eCLIP12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 ATP2C2O75185 946 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 RBP3P10745 1247 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 TYMPP19971 482 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 ACAT1P24752 427 aaKnown RBP12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 NR2C2P49116 596 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 ADIGQ0VDE8 80 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 XRCC4Q13426 336 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 STAT4Q14765 748 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 RNASEH2BQ5TBB1 312 aaKnown RBP12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 SLC9A4Q6AI14 798 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 SLC8B1Q6J4K2 584 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 PAQR9Q6ZVX9 377 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 FAM35AQ86V20 835 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 PPIL6Q8IXY8 311 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 THEM5Q8N1Q8 247 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 SCML4Q8N228 414 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 FBXL6Q8N531 539 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 SH2D3CQ8N5H7 860 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 NT5C3BQ969T7 300 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 ASIC4Q96FT7 647 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 MYADMQ96S97 322 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 TRIM62Q9BVG3 475 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 PPCSQ9HAB8 311 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 POPDC2Q9HBU9 364 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 CRTAC1Q9NQ79 661 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 KRT82Q9NSB4 513 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 NOVA2Q9UNW9 492 aaKnown RBP12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 TIMM13Q9Y5L4 95 aaPredicted RBP12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 PLXNA3P51805 1871 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 AP1G2O75843 785 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 IFNB1P01574 187 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 SHBGP04278 402 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 LAMP2P13473 410 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 FSHRP23945 695 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 HOXA9P31269 272 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 L1CAMP32004 1257 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 CHKAP35790 457 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 MAGEA4P43358 317 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 IRAK1P51617 712 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 TKTL1P51854 596 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 PPP2R2AP63151 447 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 NTHL1P78549 312 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 ADCY1Q08828 1119 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 MMRN1Q13201 1228 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 TDGQ13569 410 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 KCTD19Q17RG1 926 aaPredicted RBP12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 RAB41Q5JT25 222 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 ZNF280DQ6N043 979 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 DARS2Q6PI48 645 aaKnown RBP12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 CENPUQ71F23 418 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 PLD5Q8N7P1 536 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 CLEC4CQ8WTT0 213 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 IRGQQ8WZA9 623 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 FAM149B1Q96BN6 582 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 RTP4Q96DX8 246 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 SLC2A13Q96QE2 648 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 RBM15Q96T37 977 aaKnown RBP eCLIP12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 FRMD8Q9BZ67 464 aaPredicted RBP12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 CYP4F11Q9HBI6 524 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 CSNK1G1Q9HCP0 422 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 PNPLA8Q9NP80 782 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 TMEM51Q9NW97 253 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 IGSF9Q9P2J2 1179 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 PCDHB8Q9UN66 801 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 AP4E1Q9UPM8 1137 aa12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 ARIH1Q9Y4X5 557 aaPredicted RBP12.35□□□□□ -0.43
CYB561A3-215ENST00000540317 BCLAF3A2AJT9 711 aaKnown RBP12.34□□□□□ -0.43
CYB561A3-215ENST00000540317 WDR27A2RRH5 827 aa12.34□□□□□ -0.43
CYB561A3-215ENST00000540317 H7C0C1 242 aa12.34□□□□□ -0.43
CYB561A3-215ENST00000540317 CLDN5O00501 218 aa12.34□□□□□ -0.43
CYB561A3-215ENST00000540317 ABLIM3O94929 683 aa12.34□□□□□ -0.43
CYB561A3-215ENST00000540317 PAPLNO95428 1278 aa12.34□□□□□ -0.43
CYB561A3-215ENST00000540317 ZSCAN5DPP0CG00 497 aa12.34□□□□□ -0.43
CYB561A3-215ENST00000540317 IL4RP24394 825 aa12.34□□□□□ -0.43
CYB561A3-215ENST00000540317 ARL4AP40617 200 aa12.34□□□□□ -0.43
CYB561A3-215ENST00000540317 MDH1P40925 334 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms