RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 NUCB2P80303 420 aa8.79□□□□□ -1
USP28-203ENST00000537490 RING1Q06587 406 aa8.79□□□□□ -1
USP28-203ENST00000537490 STIM1Q13586 685 aa8.79□□□□□ -1
USP28-203ENST00000537490 STILQ15468 1287 aa8.79□□□□□ -1
USP28-203ENST00000537490 ZNF423Q2M1K9 1284 aa8.79□□□□□ -1
USP28-203ENST00000537490 HLA-BQ31612 363 aa8.79□□□□□ -1
USP28-203ENST00000537490 MPP7Q5T2T1 576 aa8.79□□□□□ -1
USP28-203ENST00000537490 NUGGCQ68CJ6 796 aa8.79□□□□□ -1
USP28-203ENST00000537490 RAB44Q7Z6P3 723 aaPredicted RBP8.79□□□□□ -1
USP28-203ENST00000537490 SLCO6A1Q86UG4 719 aa8.79□□□□□ -1
USP28-203ENST00000537490 NAXDQ8IW45 347 aa8.79□□□□□ -1
USP28-203ENST00000537490 UNC45BQ8IWX7 931 aa8.79□□□□□ -1
USP28-203ENST00000537490 SCUBE3Q8IX30 993 aa8.79□□□□□ -1
USP28-203ENST00000537490 ELOA2Q8IYF1 753 aaPredicted RBP8.79□□□□□ -1
USP28-203ENST00000537490 AHI1Q8N157 1196 aa8.79□□□□□ -1
USP28-203ENST00000537490 PNPLA1Q8N8W4 532 aa8.79□□□□□ -1
USP28-203ENST00000537490 FIBINQ8TAL6 211 aa8.79□□□□□ -1
USP28-203ENST00000537490 DQX1Q8TE96 717 aaKnown RBP8.79□□□□□ -1
USP28-203ENST00000537490 NELFBQ8WX92 580 aa8.79□□□□□ -1
USP28-203ENST00000537490 ZCCHC14Q8WYQ9 949 aaKnown RBP8.79□□□□□ -1
USP28-203ENST00000537490 AZIN2Q96A70 460 aa8.79□□□□□ -1
USP28-203ENST00000537490 MYO19Q96H55 970 aa8.79□□□□□ -1
USP28-203ENST00000537490 FCRL2Q96LA5 508 aaPredicted RBP8.79□□□□□ -1
USP28-203ENST00000537490 PRICKLE1Q96MT3 831 aaPredicted RBP8.79□□□□□ -1
USP28-203ENST00000537490 SUN2Q9UH99 717 aa8.79□□□□□ -1
USP28-203ENST00000537490 HOOK1Q9UJC3 728 aaKnown RBP8.79□□□□□ -1
USP28-203ENST00000537490 INTS6Q9UL03 887 aaKnown RBP8.79□□□□□ -1
USP28-203ENST00000537490 NAALADL1Q9UQQ1 740 aa8.79□□□□□ -1
USP28-203ENST00000537490 FNDC3AQ9Y2H6 1198 aaKnown RBP8.79□□□□□ -1
USP28-203ENST00000537490 PCDHB9Q9Y5E1 797 aa8.79□□□□□ -1
USP28-203ENST00000537490 CEP192Q8TEP8 1941 aa8.79□□□□□ -1
USP28-203ENST00000537490 TAF4O00268 1085 aa8.78□□□□□ -1
USP28-203ENST00000537490 BIN1O00499 593 aa8.78□□□□□ -1
USP28-203ENST00000537490 KCNK3O14649 394 aa8.78□□□□□ -1
USP28-203ENST00000537490 IRAK2O43187 625 aa8.78□□□□□ -1
USP28-203ENST00000537490 FBXO21O94952 628 aa8.78□□□□□ -1
USP28-203ENST00000537490 SEMA4FO95754 770 aa8.78□□□□□ -1
USP28-203ENST00000537490 ATP5BP06576 529 aaKnown RBP8.78□□□□□ -1
USP28-203ENST00000537490 FTH1P19P0C7X4 201 aa8.78□□□□□ -1
USP28-203ENST00000537490 PPP1R2P41236 205 aa8.78□□□□□ -1
USP28-203ENST00000537490 MATKP42679 507 aa8.78□□□□□ -1
USP28-203ENST00000537490 RPL34P49207 117 aaKnown RBP8.78□□□□□ -1
USP28-203ENST00000537490 GCNT1Q02742 428 aa8.78□□□□□ -1
USP28-203ENST00000537490 CETN1Q12798 172 aa8.78□□□□□ -1
USP28-203ENST00000537490 KCNH2Q12809 1159 aa8.78□□□□□ -1
USP28-203ENST00000537490 MORC3Q14149 939 aa8.78□□□□□ -1
USP28-203ENST00000537490 KIF19Q2TAC6 998 aa8.78□□□□□ -1
USP28-203ENST00000537490 FSCBQ5H9T9 825 aa8.78□□□□□ -1
USP28-203ENST00000537490 MS4A13Q5J8X5 152 aa8.78□□□□□ -1
USP28-203ENST00000537490 SYPL2Q5VXT5 272 aa8.78□□□□□ -1
USP28-203ENST00000537490 DENND1BQ6P3S1 775 aa8.78□□□□□ -1
USP28-203ENST00000537490 DBX2Q6ZNG2 339 aa8.78□□□□□ -1
USP28-203ENST00000537490 MMS22LQ6ZRQ5 1243 aa8.78□□□□□ -1
USP28-203ENST00000537490 MFN1Q8IWA4 741 aa8.78□□□□□ -1
USP28-203ENST00000537490 TRIM59Q8IWR1 403 aa8.78□□□□□ -1
USP28-203ENST00000537490 ADAM32Q8TC27 787 aa8.78□□□□□ -1
USP28-203ENST00000537490 ADAMTS14Q8WXS8 1223 aa8.78□□□□□ -1
USP28-203ENST00000537490 SNX19Q92543 992 aa8.78□□□□□ -1
USP28-203ENST00000537490 GOLGA1Q92805 767 aa8.78□□□□□ -1
USP28-203ENST00000537490 TTC17Q96AE7 1141 aa8.78□□□□□ -1
USP28-203ENST00000537490 BIRC7Q96CA5 298 aa8.78□□□□□ -1
USP28-203ENST00000537490 SLC39A13Q96H72 371 aa8.78□□□□□ -1
USP28-203ENST00000537490 MRGPRX3Q96LB0 322 aa8.78□□□□□ -1
USP28-203ENST00000537490 ORAI3Q9BRQ5 295 aa8.78□□□□□ -1
USP28-203ENST00000537490 SRRTQ9BXP5 876 aaKnown RBP8.78□□□□□ -1
USP28-203ENST00000537490 IRX2Q9BZI1 471 aaPredicted RBP8.78□□□□□ -1
USP28-203ENST00000537490 BTBD1Q9H0C5 482 aa8.78□□□□□ -1
USP28-203ENST00000537490 NUCKS1Q9H1E3 243 aaKnown RBP8.78□□□□□ -1
USP28-203ENST00000537490 PCED1AQ9H1Q7 454 aa8.78□□□□□ -1
USP28-203ENST00000537490 ST7Q9NRC1 585 aa8.78□□□□□ -1
USP28-203ENST00000537490 TM7SF3Q9NS93 570 aa8.78□□□□□ -1
USP28-203ENST00000537490 CYTH4Q9UIA0 394 aa8.78□□□□□ -1
USP28-203ENST00000537490 XPO7Q9UIA9 1087 aaKnown RBP8.78□□□□□ -1
USP28-203ENST00000537490 PCOLCE2Q9UKZ9 415 aa8.78□□□□□ -1
USP28-203ENST00000537490 CNTN6Q9UQ52 1028 aa8.78□□□□□ -1
USP28-203ENST00000537490 CTNND2Q9UQB3 1225 aa8.78□□□□□ -1
USP28-203ENST00000537490 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.78□□□□□ -1
USP28-203ENST00000537490 GTF3C3Q9Y5Q9 886 aa8.78□□□□□ -1
USP28-203ENST00000537490 IGF2RP11717 2491 aa8.78□□□□□ -1
USP28-203ENST00000537490 NUMA1Q14980 2115 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 PAPSS1O43252 624 aaPredicted RBP8.77□□□□□ -1.01
USP28-203ENST00000537490 SIN3BO75182 1162 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 GADD45BO75293 160 aaPredicted RBP8.77□□□□□ -1.01
USP28-203ENST00000537490 FSBPO95073 299 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 CER1O95813 267 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 MOCS2O96007 188 aaPredicted RBP8.77□□□□□ -1.01
USP28-203ENST00000537490 DNTTP04053 509 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 CAPNS1P04632 268 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 ZNF883P0CG24 379 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 CSKP41240 450 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 ZBTB16Q05516 673 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 DCAF6Q58WW2 860 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 KCNT1Q5JUK3 1230 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 ZNF776Q68DI1 518 aaPredicted RBP8.77□□□□□ -1.01
USP28-203ENST00000537490 FOXR2Q6PJQ5 311 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 IL27RAQ6UWB1 636 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 LAYNQ6UX15 382 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 GLRX5Q86SX6 157 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 TAC4Q86UU9 113 aa8.77□□□□□ -1.01
USP28-203ENST00000537490 DHX40Q8IX18 779 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms