RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 USH1CQ9Y6N9 552 aa12.37□□□□□ -0.43
LINC01089-204ENST00000535643 PRPF4O43172 522 aaKnown RBP eCLIP12.36□□□□□ -0.438e-7■■□□□ 12.1
LINC01089-204ENST00000535643 SPOPO43791 374 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 MYBL1P10243 752 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 STX2P32856 288 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 KPNA1P52294 538 aaPredicted RBP12.36□□□□□ -0.43
LINC01089-204ENST00000535643 KCNJ2P63252 427 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 MRPS35P82673 323 aaKnown RBP12.36□□□□□ -0.43
LINC01089-204ENST00000535643 CBWD6Q4V339 395 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 CBWD3Q5JTY5 395 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 CBWD5Q5RIA9 395 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 NUGGCQ68CJ6 796 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 CAPRIN2Q6IMN6 1127 aaKnown RBP12.36□□□□□ -0.43
LINC01089-204ENST00000535643 USP17L6PQ6QN14 398 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 VITQ6UXI7 678 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 LMNTD2Q8IXW0 634 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 NME8Q8N427 588 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 ENDOVQ8N8Q3 282 aaKnown RBP12.36□□□□□ -0.43
LINC01089-204ENST00000535643 ZNF564Q8TBZ8 553 aaPredicted RBP12.36□□□□□ -0.43
LINC01089-204ENST00000535643 PSPC1Q8WXF1 523 aaKnown RBP12.36□□□□□ -0.43
LINC01089-204ENST00000535643 KRT35Q92764 455 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 SLC5A5Q92911 643 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 PDCD2LQ9BRP1 358 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 TUBB6Q9BUF5 446 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 HERC2P3Q9BVR0 1158 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 RNPEPL1Q9HAU8 725 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 ZFP14Q9HCL3 533 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 SSU72Q9NP77 194 aaKnown RBP12.36□□□□□ -0.43
LINC01089-204ENST00000535643 TBC1D13Q9NVG8 400 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 EURLQ9NYK6 297 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 ADAM22Q9P0K1 906 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 NOCTQ9UK39 431 aaKnown RBP12.36□□□□□ -0.43
LINC01089-204ENST00000535643 LRRC42Q9Y546 428 aa12.36□□□□□ -0.43
LINC01089-204ENST00000535643 CABIN1Q9Y6J0 2220 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 ANKHD1Q8IWZ3 2542 aaKnown RBP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 SPECC1L-ADORA2AF8WAN1 911 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 FOXN3O00409 490 aaPredicted RBP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 ZNF862O60290 1169 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 EXOC3O60645 756 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 ATP9AO75110 1047 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 GJB3O75712 270 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 NEBLO76041 1014 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 HNRNPA1P09651 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 ATXN1LP0C7T5 689 aaKnown RBP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 INSRRP14616 1297 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 BRAFP15056 766 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 ATF2P15336 505 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 CTHP32929 405 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 GCKP35557 465 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 TIE1P35590 1138 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 IFNAR2P48551 515 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 MFAP3P55082 362 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 LBRQ14739 615 aaKnown RBP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 SMAD1Q15797 465 aaKnown RBP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 SGSM1Q2NKQ1 1148 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 PABPC1LQ4VXU2 614 aaKnown RBP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 SGO2Q562F6 1265 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 MIS18BP1Q6P0N0 1132 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 ARMCX6Q7L4S7 300 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 ENOSF1Q7L5Y1 443 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 APBB1IPQ7Z5R6 666 aaPredicted RBP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 IL31RAQ8NI17 732 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 EPS8L1Q8TE68 723 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 SHC3Q92529 594 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 KIFAP3Q92845 792 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 SAAL1Q96ER3 474 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 ZNF570Q96NI8 536 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 APOL6Q9BWW8 343 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 CCDC113Q9H0I3 377 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 C8orf33Q9H7E9 229 aaPredicted RBP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 SAR1AQ9NR31 198 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 SPATS2LQ9NUQ6 558 aaKnown RBP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 SEPT11Q9NVA2 429 aaKnown RBP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 TAS2R14Q9NYV8 317 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 FETUBQ9UGM5 382 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 EBF1Q9UH73 591 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 PCOLCE2Q9UKZ9 415 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 SLC6A14Q9UN76 642 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 MRPS23Q9Y3D9 190 aaKnown RBP12.35□□□□□ -0.43
LINC01089-204ENST00000535643 AK5Q9Y6K8 562 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 NBEAL1Q6ZS30 2694 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 AKAP9Q99996 3911 aa12.35□□□□□ -0.43
LINC01089-204ENST00000535643 IGLV3-22A0A075B6J6 115 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 SMIM35A0A1B0GVV1 85 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 MYBPHLA2RUH7 354 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 FAM47DPA6NHR8 397 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 A6NHS1 94 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 RRN3P2A6NIE6 340 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 SMIM23A6NLE4 172 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 TNFRSF10BO14763 440 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 THAP12O43422 761 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 AHCYL1O43865 530 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 DIAPH2O60879 1101 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 ATG13O75143 517 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 PSMD10O75832 226 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 ITGB2P05107 769 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 KRT16P08779 473 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 PYGMP11217 842 aa12.34□□□□□ -0.43
LINC01089-204ENST00000535643 CALB2P22676 271 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms