RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 ZNF606Q8WXB4 792 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 NELL1Q92832 810 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 LSM14BQ9BX40 385 aaKnown RBP9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 EPC1Q9H2F5 836 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 PLCB1Q9NQ66 1216 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 CNGB3Q9NQW8 809 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 OLA1Q9NTK5 396 aaKnown RBP9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 AGO1Q9UL18 857 aaKnown RBP9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 ZNF510Q9Y2H8 683 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 CACNA1HO95180 2353 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 USP34Q70CQ2 3546 aa9.32□□□□□ -0.92
CCDC90B-219ENST00000534753 MYO15AQ9UKN7 3530 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 SYNJ2BP-COX16A0A087WUM0 186 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 A0A1W2PNR3 127 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 BECN2A8MW95 431 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 SGK1O00141 431 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 FOXN3O00409 490 aaPredicted RBP9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 CAPN9O14815 690 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 FBXO21O94952 628 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 PAPSS2O95340 614 aaPredicted RBP9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 CDK11BP21127 795 aaKnown RBP9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 KRT9P35527 623 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 CHKAP35790 457 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 EIF2DP41214 584 aaKnown RBP9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 GPD2P43304 727 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 TNFRSF4P43489 277 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 MRPS21P82921 87 aaKnown RBP9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 CCDC6Q16204 474 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 PREPLQ4J6C6 727 aaPredicted RBP9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 MIIPQ5JXC2 388 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 TAF3Q5VWG9 929 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 SDE2Q6IQ49 451 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 KBTBD6Q86V97 674 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 ZNF276Q8N554 614 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 CAMKK1Q8N5S9 505 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 TERB1Q8NA31 727 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 IL17RCQ8NAC3 791 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 HMGB4Q8WW32 186 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 PLD4Q96BZ4 506 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 HSFY1Q96LI6 401 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 FAM81BQ96LP2 452 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 CITED4Q96RK1 184 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 SYNCQ9H7C4 482 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 SIX2Q9NPC8 291 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 ANO10Q9NW15 660 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 FANCLQ9NW38 375 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 COX16Q9P0S2 106 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 CYTH4Q9UIA0 394 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 MMP17Q9ULZ9 603 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 NAALADL1Q9UQQ1 740 aa9.31□□□□□ -0.92
CCDC90B-219ENST00000534753 A0A1B0GTH6 734 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 GOLGA6L7A0A1B0GV03 622 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 TCRBV21S2A2A0A5A6 115 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 GTPBP10A4D1E9 387 aaKnown RBP9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 PRRT4C9JH25 899 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 E5RJQ4 531 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 CACNG3O60359 315 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 GRAP2O75791 330 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 ALDH1A2O94788 518 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 MBD3O95983 291 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 MOCS2O96007 188 aaPredicted RBP9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 HNRNPLP14866 589 aaKnown RBP eCLIP9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 EEF1GP26641 437 aaKnown RBP9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 GRNP28799 593 aaKnown RBP9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 CNR2P34972 360 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 ACADSBP45954 432 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 TBX4P57082 545 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 ARID5AQ03989 594 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 DRAP1Q14919 205 aaPredicted RBP9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 CRY1Q16526 586 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 STX1AQ16623 288 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 EOGTQ5NDL2 527 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 CCDC183Q5T5S1 534 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 EGFLAMQ63HQ2 1017 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 LAIR1Q6GTX8 287 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 OR6B2Q6IFH4 312 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 RFWD3Q6PCD5 774 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 CACNA2D4Q7Z3S7 1137 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 BTLAQ7Z6A9 289 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 SLC47A2Q86VL8 602 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 CHPFQ8IZ52 775 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 ENOX1Q8TC92 643 aaKnown RBP9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 GAB3Q8WWW8 586 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 RLN3Q8WXF3 142 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 IRGQQ8WZA9 623 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 SHC3Q92529 594 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 ACOX2Q99424 681 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 ARRDC1-AS1Q9H2J1 176 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 TJP2Q9UDY2 1190 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 CNTN6Q9UQ52 1028 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 HBS1LQ9Y450 684 aaKnown RBP9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 FHOD1Q9Y613 1164 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 RAD54BQ9Y620 910 aa9.3□□□□□ -0.92
CCDC90B-219ENST00000534753 WDR87Q6ZQQ6 2873 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 WASH3PC4AMC7 463 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 ADAM23O75077 832 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 HOXB2P14652 356 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 NTSR1P30989 418 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 HOXA6P31267 233 aa9.29□□□□□ -0.92
CCDC90B-219ENST00000534753 KIR2DL1P43626 348 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms