RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 DUSP16Q9BY84 665 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 GPATCH2LQ9NWQ4 482 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 SPEF2Q9C093 1822 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 E5RJQ4 531 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 QSOX1O00391 747 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 KRT75O95678 551 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 ZNF7P17097 686 aaPredicted RBP11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 NPY2RP49146 381 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 AARSP49588 968 aaKnown RBP eCLIP11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 CYTH1Q15438 398 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 RFX8Q6ZV50 586 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 ZNF571Q7Z3V5 609 aaPredicted RBP11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 PIGZQ86VD9 579 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 DBF4BQ8NFT6 615 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 DUSP9Q99956 384 aaKnown RBP11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 CCDC90BQ9GZT6 254 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 WWP1Q9H0M0 922 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 TRABDQ9H4I3 376 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 PDP2Q9P2J9 529 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 ARHGAP28Q9P2N2 729 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 FBXO10Q9UK96 956 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 RPS6KL1Q9Y6S9 549 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 SIGLEC16A6NMB1 481 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 F8VP50 259 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 B4GALT5O43286 388 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 CHN1P15882 459 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 DAB2P98082 770 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 PLCL1Q15111 1095 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 HABP4Q5JVS0 413 aaKnown RBP11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 AGBL2Q5U5Z8 902 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 LPCAT1Q8NF37 534 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 PANX3Q96QZ0 392 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 PRMT1Q99873 361 aaKnown RBP11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 ZYG11BQ9C0D3 744 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 L2HGDHQ9H9P8 463 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 COPS7BQ9H9Q2 264 aaPredicted RBP11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 CHCHD3Q9NX63 227 aaKnown RBP11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 RAD54BQ9Y620 910 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 DOT1LQ8TEK3 1739 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 A0A1W2PQ67 120 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 H3BMM5 538 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 H2AFXP16104 143 aaPredicted RBP11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 AAK1Q2M2I8 961 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 TPGS2Q68CL5 300 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 NAIF1Q69YI7 327 aaPredicted RBP11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 CEP68Q76N32 757 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 NT5DC3Q86UY8 548 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 IRGQQ8WZA9 623 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 GANQ9H2C0 597 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 ARHGAP26Q9UNA1 814 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 ASTN1O14525 1302 aa11.54□□□□□ -0.56
AMBRA1-211ENST00000533727 ERVK-10P10266 1014 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 SERPINB10P48595 397 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 RAP1GDS1P52306 607 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 HIRAP54198 1017 aaPredicted RBP11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 PMS1P54277 932 aaKnown RBP11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 ARHGAP1Q07960 439 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 ZNF792Q3KQV3 632 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 LRRC38Q5VT99 294 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 SCUBE3Q8IX30 993 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 ZNF296Q8WUU4 475 aaPredicted RBP11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 ATXN7L3BQ96GX2 97 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 APOL5Q9BWW9 433 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 FAM153AQ9UHL3 310 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 E2F6O75461 281 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 ADRB2P07550 413 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 OR56A5P0C7T3 313 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 HTR7P34969 479 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 MMP13P45452 471 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 GPR158Q5T848 1215 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 STK40Q8N2I9 435 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 DACH2Q96NX9 599 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 PDZD7Q9H5P4 517 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 RHBDL2Q9NX52 303 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 CDY1Q9Y6F8 540 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 COL16A1Q07092 1604 aaPredicted RBP11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 TLR5O60602 858 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 PLEKP08567 350 aaPredicted RBP11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 KITP10721 976 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 ITGA8P53708 1063 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 POU4F1Q01851 419 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 GPM6BQ13491 265 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 TP53BP2Q13625 1128 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 FLOT2Q14254 428 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 SHROOM1Q2M3G4 852 aaPredicted RBP11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 MPPE1Q53F39 396 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 KIAA1324Q6UXG2 1013 aaKnown RBP11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 C3orf62Q6ZUJ4 267 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 TFAP2DQ7Z6R9 452 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 MAGEC3Q8TD91 643 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 FUT8Q9BYC5 575 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 CYLDQ9NQC7 956 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 CHORDC1Q9UHD1 332 aaPredicted RBP11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 PRDM4Q9UKN5 801 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 C4BP0C0L5 1744 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 SNUPNO95149 360 aaKnown RBP11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 FAM163BP0C2L3 166 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 CTSEP14091 401 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 KELP23276 732 aa11.53□□□□□ -0.56
AMBRA1-211ENST00000533727 MAPK1P28482 360 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms