RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SCML2Q9UQR0 700 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 PCDHB9Q9Y5E1 797 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 FHOD1Q9Y613 1164 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 RAD54BQ9Y620 910 aa9.1□□□□□ -0.95
COPB1-210ENST00000533533 LGALS16A8MUM7 142 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 TULP2O00295 520 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 O00370 1275 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 XPO1O14980 1071 aaKnown RBP9.09□□□□□ -0.95
COPB1-210ENST00000533533 CYP26A1O43174 497 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 LCP1P13796 627 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 ZNF18P17022 549 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 PLA2G4AP47712 749 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 POLR2FP61218 127 aaKnown RBP9.09□□□□□ -0.95
COPB1-210ENST00000533533 PTK2Q05397 1052 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 SCAPQ12770 1279 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 GRIK2Q13002 908 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 STARD3Q14849 445 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 DRAP1Q14919 205 aaPredicted RBP9.09□□□□□ -0.95
COPB1-210ENST00000533533 STILQ15468 1287 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 CNGA2Q16280 664 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 KLHDC7AQ5VTJ3 777 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 LCLAT1Q6UWP7 414 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 CCNI2Q6ZMN8 369 aaPredicted RBP9.09□□□□□ -0.95
COPB1-210ENST00000533533 Q6ZNB5 142 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 NAXDQ8IW45 347 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 SIX6OS1Q8N1H7 587 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 PNPLA1Q8N8W4 532 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 DNASE2BQ8WZ79 361 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 BHMTQ93088 406 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 TOE1Q96GM8 510 aaKnown RBP9.09□□□□□ -0.95
COPB1-210ENST00000533533 OCEL1Q9H607 264 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 NMUR1Q9HB89 426 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 PNPLA8Q9NP80 782 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 ACP6Q9NPH0 428 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 NLRC4Q9NPP4 1024 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.09□□□□□ -0.95
COPB1-210ENST00000533533 WSB2Q9NYS7 404 aaPredicted RBP9.09□□□□□ -0.95
COPB1-210ENST00000533533 PLK2Q9NYY3 685 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 USP36Q9P275 1121 aaKnown RBP9.09□□□□□ -0.95
COPB1-210ENST00000533533 DNMT3LQ9UJW3 386 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 NAGPAQ9UK23 515 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.09□□□□□ -0.95
COPB1-210ENST00000533533 SLC27A6Q9Y2P4 619 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 GPSM3Q9Y4H4 160 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 STON1Q9Y6Q2 735 aa9.09□□□□□ -0.95
COPB1-210ENST00000533533 ARID1BQ8NFD5 2236 aaPredicted RBP9.09□□□□□ -0.95
COPB1-210ENST00000533533 TMEM131Q92545 1883 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 SHROOM3Q8TF72 1996 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 A0A1B0GTW7 788 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 A0A1W2PQH9 124 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 FAM170AA1A519 330 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 MEI4A8MW99 385 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 HHLA1C9JL84 531 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 FOXN3O00409 490 aaPredicted RBP9.08□□□□□ -0.96
COPB1-210ENST00000533533 NPC1O15118 1278 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 MDM4O15151 490 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 CBFA2T3O75081 653 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 STC2O76061 302 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 PENKP01210 267 aaPredicted RBP9.08□□□□□ -0.96
COPB1-210ENST00000533533 SETSIPP0DME0 302 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 NCAM1P13591 858 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 RARGP13631 454 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 UCHL3P15374 230 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 KRT9P35527 623 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 TKTL1P51854 596 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 KIF11P52732 1056 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 ZNF132P52740 706 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 ADIGQ0VDE8 80 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 ENPP2Q13822 863 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 IQCB1Q15051 598 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 FUT11Q495W5 492 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 C10orf120Q5SQS8 335 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 DENND1BQ6P3S1 775 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 RSRC2Q7L4I2 434 aaKnown RBP9.08□□□□□ -0.96
COPB1-210ENST00000533533 GLRX5Q86SX6 157 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 PASD1Q8IV76 773 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 CADM4Q8NFZ8 388 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 ZNF606Q8WXB4 792 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 SHC3Q92529 594 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 NDRG1Q92597 394 aaKnown RBP9.08□□□□□ -0.96
COPB1-210ENST00000533533 P2RY11Q96G91 374 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 SPAG5Q96R06 1193 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 ZSWIM1Q9BR11 485 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 GPR174Q9BXC1 333 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 ULBP1Q9BZM6 244 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 MKRN2Q9H000 416 aaKnown RBP9.08□□□□□ -0.96
COPB1-210ENST00000533533 MIS12Q9H081 205 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 HSD3B7Q9H2F3 369 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 TSPY26PQ9H489 355 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 PRDM16Q9HAZ2 1276 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 ITM2CQ9NQX7 267 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 NUDT5Q9UKK9 219 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 APOBEC2Q9Y235 224 aaKnown RBP9.08□□□□□ -0.96
COPB1-210ENST00000533533 ZNF510Q9Y2H8 683 aa9.08□□□□□ -0.96
COPB1-210ENST00000533533 KALRNO60229 2985 aa9.07□□□□□ -0.96
COPB1-210ENST00000533533 TEX33O43247 280 aa9.07□□□□□ -0.96
COPB1-210ENST00000533533 GFPT2O94808 682 aa9.07□□□□□ -0.96
COPB1-210ENST00000533533 ZBED1O96006 694 aa9.07□□□□□ -0.96
COPB1-210ENST00000533533 KLKB1P03952 638 aa9.07□□□□□ -0.96
COPB1-210ENST00000533533 ZNF883P0CG24 379 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms