RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 DRG2P55039 364 aaKnown RBP12.53□□□□□ -0.4
BDNF-218ENST00000533246 FUT11Q495W5 492 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 PTRHD1Q6GMV3 140 aaKnown RBP12.53□□□□□ -0.4
BDNF-218ENST00000533246 TMC5Q6UXY8 1006 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 ILDR2Q71H61 639 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 DCP1BQ8IZD4 617 aaKnown RBP12.53□□□□□ -0.4
BDNF-218ENST00000533246 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 OR52K1Q8NGK4 314 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 CKAP2Q8WWK9 683 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 CORO1BQ9BR76 489 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 MECRQ9BV79 373 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 CLIC5Q9NZA1 410 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 IL1RAPL1Q9NZN1 696 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 ARHGAP26Q9UNA1 814 aa12.53□□□□□ -0.4
BDNF-218ENST00000533246 BTNL10A8MVZ5 291 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 ANXA9O76027 345 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 FARP2O94887 1054 aaPredicted RBP12.52□□□□□ -0.4
BDNF-218ENST00000533246 CD48P09326 243 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 PAEPP09466 180 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 CCDC166P0CW27 439 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 STMN1P16949 149 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 DNAJB2P25686 324 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 PSMB4P28070 264 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 SCNN1GP51170 649 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 DCTN2Q13561 401 aaKnown RBP12.52□□□□□ -0.4
BDNF-218ENST00000533246 ASTE1Q2TB18 679 aaPredicted RBP12.52□□□□□ -0.4
BDNF-218ENST00000533246 TCHHL1Q5QJ38 904 aaPredicted RBP12.52□□□□□ -0.4
BDNF-218ENST00000533246 PPP1R26Q5T8A7 1209 aaPredicted RBP12.52□□□□□ -0.4
BDNF-218ENST00000533246 PATL1Q86TB9 770 aaKnown RBP12.52□□□□□ -0.4
BDNF-218ENST00000533246 DEFB107AQ8IZN7 70 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 GIPC2Q8TF65 315 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 ZFAND2BQ8WV99 257 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 TMEM134Q9H6X4 195 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 NRDE2Q9H7Z3 1164 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 PKP3Q9Y446 797 aa12.52□□□□□ -0.4
BDNF-218ENST00000533246 MROH7Q68CQ1 1323 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 hCG_1818297A0A087WSY0 165 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 TMEM191CA6NGB0 347 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 XPO1O14980 1071 aaKnown RBP12.52□□□□□ -0.41
BDNF-218ENST00000533246 HNRNPCL1O60812 293 aaKnown RBP12.52□□□□□ -0.41
BDNF-218ENST00000533246 ZMPSTE24O75844 475 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 F9P00740 461 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 ACADSP16219 412 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 GOT1P17174 413 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 AKT1P31749 480 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 CCR1P32246 355 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 VHLP40337 213 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 KPNB1Q14974 876 aaKnown RBP12.52□□□□□ -0.41
BDNF-218ENST00000533246 TAF5Q15542 800 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 CCDC153Q494R4 210 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 LENG1Q96BZ8 264 aaPredicted RBP12.52□□□□□ -0.41
BDNF-218ENST00000533246 TKTL2Q9H0I9 626 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 NXF3Q9H4D5 531 aaKnown RBP12.52□□□□□ -0.41
BDNF-218ENST00000533246 PCDH18Q9HCL0 1135 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 SLC8A2Q9UPR5 921 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 KAT6AQ92794 2004 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 STX7O15400 261 aaKnown RBP12.52□□□□□ -0.41
BDNF-218ENST00000533246 ESRRBO95718 433 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 SP100P23497 879 aaPredicted RBP12.52□□□□□ -0.41
BDNF-218ENST00000533246 C16orf72Q14CZ0 275 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 CTXN3Q4LDR2 81 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 TFAP2BQ92481 460 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 RNF157Q96PX1 679 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 EML4Q9HC35 981 aaKnown RBP12.52□□□□□ -0.41
BDNF-218ENST00000533246 FBXO6Q9NRD1 293 aaPredicted RBP12.52□□□□□ -0.41
BDNF-218ENST00000533246 TNFSF13BQ9Y275 285 aa12.52□□□□□ -0.41
BDNF-218ENST00000533246 NRXN3Q9Y4C0 1643 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 CFHP08603 1231 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 KRT33BQ14525 404 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 IRGCQ6NXR0 463 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 STKLD1Q8NE28 680 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 NAT9Q9BTE0 207 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 APOBEC3GQ9HC16 384 aaKnown RBP12.51□□□□□ -0.41
BDNF-218ENST00000533246 LRRC4CQ9HCJ2 640 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 GPAMQ9HCL2 828 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 DMAC2Q9NW81 257 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 SYNPO2Q9UMS6 1093 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 LRCH1Q9Y2L9 728 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 NR2E3Q9Y5X4 410 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 GPR25O00155 361 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 AP3B1O00203 1094 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 ENTPD5O75356 428 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 CHRNB2P17787 502 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 PTPN4P29074 926 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 HARS2P49590 506 aaKnown RBP12.51□□□□□ -0.41
BDNF-218ENST00000533246 TUBP50607 506 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 NAGLUP54802 743 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 DDX39BQ13838 428 aaKnown RBP12.51□□□□□ -0.41
BDNF-218ENST00000533246 MFSD10Q14728 455 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 SDHAF4Q5VUM1 108 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 IYDQ6PHW0 289 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 PHF13Q86YI8 300 aaPredicted RBP12.51□□□□□ -0.41
BDNF-218ENST00000533246 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 ATXN2LQ8WWM7 1075 aaKnown RBP12.51□□□□□ -0.41
BDNF-218ENST00000533246 FAM192AQ9GZU8 254 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 RUBCNLQ9H714 662 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 MAN1C1Q9NR34 630 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 DCDC2Q9UHG0 476 aa12.51□□□□□ -0.41
BDNF-218ENST00000533246 CROTQ9UKG9 612 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms