RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 FAM84AQ96KN4 292 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 VAT1Q99536 393 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 FTHL17Q9BXU8 183 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 MFSD1Q9H3U5 465 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 SPG21Q9NZD8 308 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 ST3GAL5Q9UNP4 418 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 RGPD8O14715 1765 aaPredicted RBP15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 PCNAP12004 261 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 SARSP49591 514 aaKnown RBP15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 ACAP1Q15027 740 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 ACTL9Q8TC94 416 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 ACTRT1Q8TDG2 376 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 THAP11Q96EK4 314 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 TMEM114B3SHH9 223 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 NR2C2P49116 596 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 PCDH9Q9HC56 1237 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 KLC4Q9NSK0 619 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 SLC24A2Q9UI40 661 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 ZNF839A8K0R7 811 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 ALBP02768 609 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 AADACL2Q6P093 401 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 MAGEB10Q96LZ2 347 aaPredicted RBP15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 PRRG3Q9BZD7 231 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 MIEF1Q9NQG6 463 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 KLHL28Q9NXS3 571 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 HMGCRP04035 888 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 CD151P48509 253 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 COL9A3Q14050 684 aaPredicted RBP15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 SEL1L3Q68CR1 1132 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 LRRN4Q8WUT4 740 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 PPP1R16AQ96I34 528 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 PANX3Q96QZ0 392 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 HTATIP2Q9BUP3 242 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 TMEM245Q9H330 911 aa15.12■□□□□ 0.01
PCDHA9-202ENST00000532602 CLDN5O00501 218 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 ADCY6O43306 1168 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 OR56A5P0C7T3 313 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 PPP2R1BP30154 601 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 E2F4Q16254 413 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 C15orf59Q2T9L4 293 aaPredicted RBP15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 DOK6Q6PKX4 331 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 GFM2Q969S9 779 aaKnown RBP15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 SEC16BQ96JE7 1060 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 ACO2Q99798 780 aaKnown RBP15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 ANKRD26Q9UPS8 1709 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 SPATA31C2B4DYI2 1134 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 MAFO75444 373 aaPredicted RBP15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 FGFR1P11362 822 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 PTPN1P18031 435 aaKnown RBP15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 SLC16A1P53985 500 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 BCL2L1Q07817 233 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 OTOAQ7RTW8 1153 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 SLC35C1Q96A29 364 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 TMEM134Q9H6X4 195 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 POLG2Q9UHN1 485 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 POLR2EP19388 210 aaKnown RBP15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 LSP1P33241 339 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 CHRNB3Q05901 458 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 UNC93AQ86WB7 457 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 TEX9Q8N6V9 391 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 MRPL48Q96GC5 212 aaKnown RBP15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 CORO1BQ9BR76 489 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 TAS2R14Q9NYV8 317 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 SEPT3Q9UH03 358 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 WDR27A2RRH5 827 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 MTA2O94776 668 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 YBX3P16989 372 aaKnown RBP eCLIP15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 CYP2C18P33260 490 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 NPY2RP49146 381 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 NUDT2P50583 147 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 DNAJC3Q13217 504 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 BMPR2Q13873 1038 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 SLC51AQ86UW1 340 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 MIER2Q8N344 545 aa15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 UBA2Q9UBT2 640 aaPredicted RBP15.11■□□□□ 0.01
PCDHA9-202ENST00000532602 GLTPD2A6NH11 291 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 HSPA13P48723 471 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 SLC6A3Q01959 620 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 ZNF544Q6NX49 715 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 SYTL1Q8IYJ3 562 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 MCOLN3Q8TDD5 553 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 POPDC2Q9HBU9 364 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 SHOC2Q9UQ13 582 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 LTFP02788 710 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 ALDH6A1Q02252 535 aaKnown RBP15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 CSHL1Q14406 222 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 ACOX1Q15067 660 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 ATP6AP1LQ52LC2 224 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 BTNL9Q6UXG8 535 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 ZBTB10Q96DT7 871 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 RAD18Q9NS91 495 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 ABCC13Q9NSE7 274 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 KPNA3O00505 521 aaPredicted RBP15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 WNT7AO00755 349 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 RAD51BO15315 384 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 ITGB5P18084 799 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 MAD2L1Q13257 205 aaPredicted RBP15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 SLC44A2Q8IWA5 706 aaPredicted RBP15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 MED8Q96G25 268 aa15.1■□□□□ 0.01
PCDHA9-202ENST00000532602 PAFAH2Q99487 392 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms