RNA–Protein interactions for RNA: ENST00000531789.1

SLC39A4-208, Transcript of solute carrier family 39 member 4, humanhuman

TSL 3

Gene SLC39A4, Length 361 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-208ENST00000531789 C6orf118Q5T5N4 469 aa13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 RBM43Q6ZSC3 357 aaKnown RBP13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 TADA2BQ86TJ2 420 aa13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 TRIM59Q8IWR1 403 aa13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 UBR7Q8N806 425 aa13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 FAM181AQ8N9Y4 354 aa13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 UBA3Q8TBC4 463 aa13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 UBXN6Q9BZV1 441 aa13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 MKRN2Q9H000 416 aaKnown RBP13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 TSPAN16Q9UKR8 245 aa13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 USP3Q9Y6I4 520 aa13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 COL5A1P20908 1838 aaPredicted RBP13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 SPTA1P02549 2419 aa13.29□□□□□ -0.28
SLC39A4-208ENST00000531789 COL6A6A6NMZ7 2263 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 CAPN8A6NHC0 703 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 AFPP02771 609 aaKnown RBP13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 PLA2G4AP47712 749 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 TPMTP51580 245 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 TKTL1P51854 596 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 BCAT1P54687 386 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 IL9RQ01113 521 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 TLE3Q04726 772 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 PDE4CQ08493 712 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 BST2Q10589 180 aaKnown RBP13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 TARDBPQ13148 414 aaKnown RBP eCLIP13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 NFKBIBQ15653 356 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 DPCR1Q3MIW9 517 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 TAF1BQ53T94 588 aaPredicted RBP13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 CAVIN1Q6NZI2 390 aaKnown RBP13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 TMEM270Q6UE05 265 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 LAYNQ6UX15 382 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 HTR3DQ70Z44 454 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 RRAGAQ7L523 313 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 CREBRFQ8IUR6 639 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 FMNL3Q8IVF7 1028 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 ARHGEF19Q8IW93 802 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 ARHGAP18Q8N392 663 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 EHBP1Q8NDI1 1231 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 SNIP1Q8TAD8 396 aaKnown RBP13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 LMO3Q8TAP4 145 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 KAT5Q92993 513 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 CLIC5Q9NZA1 410 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 RASAL2Q9UJF2 1139 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 KIAA1257Q9ULG3 409 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 STON1Q9Y6Q2 735 aa13.28□□□□□ -0.28
SLC39A4-208ENST00000531789 NEDD8-MDP1E9PL57 170 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 H0Y8X5 98 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 ERVH48-1M5A8F1 160 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 CBX4O00257 560 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 TULP2O00295 520 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 O00370 1275 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 GFRA2O00451 464 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 XPO1O14980 1071 aaKnown RBP13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 MBD3O95983 291 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 HMBSP08397 361 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 PAEPP09466 180 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 CISD3P0C7P0 127 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 TYRP14679 529 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 MARSP56192 900 aaKnown RBP13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 YWHAGP61981 247 aaKnown RBP eCLIP13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 SRSF1Q07955 248 aaKnown RBP eCLIP13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 CCDC173Q0VFZ6 552 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 EFEMP1Q12805 493 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 RTP5Q14D33 572 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 RAB41Q5JT25 222 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 KCNT1Q5JUK3 1230 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 KLHDC10Q6PID8 442 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 RSRC2Q7L4I2 434 aaKnown RBP13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 BAP1Q92560 729 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 CDK5RAP1Q96SZ6 601 aaKnown RBP13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 ULBP1Q9BZM6 244 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 INTS2Q9H0H0 1204 aaKnown RBP13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 LRRC4Q9HBW1 653 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 RWDD2AQ9UIY3 292 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 ANKRD6Q9Y2G4 727 aa13.27□□□□□ -0.29
SLC39A4-208ENST00000531789 B8ZZF3 427 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 RNF225M0QZC1 329 aaPredicted RBP13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 PCDHGA12O60330 932 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 CACNG3O60359 315 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 GREM1O60565 184 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 ZBED1O96006 694 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 CALCAP01258 141 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 SETSIPP0DME0 302 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 BRD2P25440 801 aaKnown RBP13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 AFF3P51826 1226 aaKnown RBP13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 ADIGQ0VDE8 80 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 LY6DQ14210 128 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 CCDC183Q5T5S1 534 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 TPGS1Q6ZTW0 290 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 TMPRSS6Q8IU80 811 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 SPACA3Q8IXA5 215 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 SIX6OS1Q8N1H7 587 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 ZNF276Q8N554 614 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 RBBP8NLQ8NC74 664 aaPredicted RBP13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 TFAP2BQ92481 460 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 NDRG1Q92597 394 aaKnown RBP13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 FGF11Q92914 225 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 P2RY11Q96G91 374 aa13.26□□□□□ -0.29
SLC39A4-208ENST00000531789 BBS2Q9BXC9 721 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms