RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 SETSIPP0DME0 302 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 CD59P13987 128 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 CORO1AP31146 461 aaKnown RBP18.63■□□□□ 0.57
PTPN11-204ENST00000531326 SIM1P81133 766 aaPredicted RBP18.63■□□□□ 0.57
PTPN11-204ENST00000531326 EFEMP1Q12805 493 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 ENPP2Q13822 863 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 MEA1Q16626 185 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 FUT11Q495W5 492 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 KIAA1324Q6UXG2 1013 aaKnown RBP18.63■□□□□ 0.57
PTPN11-204ENST00000531326 TADA2BQ86TJ2 420 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 NOP9Q86U38 636 aaKnown RBP18.63■□□□□ 0.57
PTPN11-204ENST00000531326 PIGZQ86VD9 579 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 EPS8L1Q8TE68 723 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 SLC35F5Q8WV83 523 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 TRIM5Q9C035 493 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 MKRN2Q9H000 416 aaKnown RBP18.63■□□□□ 0.57
PTPN11-204ENST00000531326 THAP10Q9P2Z0 257 aaPredicted RBP18.63■□□□□ 0.57
PTPN11-204ENST00000531326 NOCTQ9UK39 431 aaKnown RBP18.63■□□□□ 0.57
PTPN11-204ENST00000531326 AGO1Q9UL18 857 aaKnown RBP18.63■□□□□ 0.57
PTPN11-204ENST00000531326 CLEC4EQ9ULY5 219 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 PCDHGC3Q9UN70 934 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 ZNF510Q9Y2H8 683 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 DMXL2Q8TDJ6 3036 aa18.63■□□□□ 0.57
PTPN11-204ENST00000531326 A0A1W2PQJ5 194 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 LRRC53A6NM62 1247 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 NDUFS2O75306 463 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 GJB3O75712 270 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 GYPCP04921 128 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 MAOBP27338 520 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 IL12RB1P42701 662 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 GPD2P43304 727 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 COG7P83436 770 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 RAB41Q5JT25 222 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 E4F1Q66K89 784 aaPredicted RBP18.62■□□□□ 0.57
PTPN11-204ENST00000531326 RGL4Q8IZJ4 473 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 PIWIL1Q96J94 861 aaKnown RBP18.62■□□□□ 0.57
PTPN11-204ENST00000531326 CDK5RAP1Q96SZ6 601 aaKnown RBP18.62■□□□□ 0.57
PTPN11-204ENST00000531326 DNAAF2Q9NVR5 837 aaKnown RBP18.62■□□□□ 0.57
PTPN11-204ENST00000531326 USP36Q9P275 1121 aaKnown RBP18.62■□□□□ 0.57
PTPN11-204ENST00000531326 KLK13Q9UKR3 277 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 NEUROG3Q9Y4Z2 214 aa18.62■□□□□ 0.57
PTPN11-204ENST00000531326 CKAP5Q14008 2032 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 GABBR2O75899 941 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 CD6P30203 668 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 CHKAP35790 457 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 ZNF75DP51815 510 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 SLC8A3P57103 927 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 PLEKHG6Q3KR16 790 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 SPECC1LQ69YQ0 1117 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 PMF1Q6P1K2 205 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 BHLHA9Q7RTU4 235 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 IRF2BP2Q7Z5L9 587 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 METTL3Q86U44 580 aaKnown RBP18.61■□□□□ 0.57
PTPN11-204ENST00000531326 DENND1CQ8IV53 801 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 WDTC1Q8N5D0 677 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 SLC20A1Q8WUM9 679 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 IQCDQ96DY2 449 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 CAMK1GQ96NX5 476 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 DCLK3Q9C098 648 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 PRDM16Q9HAZ2 1276 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 WSB2Q9NYS7 404 aaPredicted RBP18.61■□□□□ 0.57
PTPN11-204ENST00000531326 CYTH4Q9UIA0 394 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 CAPN11Q9UMQ6 739 aa18.61■□□□□ 0.57
PTPN11-204ENST00000531326 FAM208BQ5VWN6 2430 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 FREM2Q5SZK8 3169 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 TMEM8BA6NDV4 472 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 SYPP08247 313 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 FERP16591 822 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 CHRNB2P17787 502 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 RPL34P49207 117 aaKnown RBP18.6■□□□□ 0.57
PTPN11-204ENST00000531326 STARD3Q14849 445 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 TAF3Q5VWG9 929 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 PASD1Q8IV76 773 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 KCTD13Q8WZ19 329 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 NDRG1Q92597 394 aaKnown RBP18.6■□□□□ 0.57
PTPN11-204ENST00000531326 FOXJ1Q92949 421 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 TOE1Q96GM8 510 aaKnown RBP18.6■□□□□ 0.57
PTPN11-204ENST00000531326 LHX5Q9H2C1 402 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 ITM2CQ9NQX7 267 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 MARCH2Q9P0N8 246 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 MSRB2Q9Y3D2 182 aa18.6■□□□□ 0.57
PTPN11-204ENST00000531326 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.6■□□□□ 0.57
PTPN11-204ENST00000531326 SLC12A8A0AV02 714 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 NPC1O15118 1278 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 MMEP08473 750 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 KRT9P35527 623 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 RGS7P49802 495 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 YWHAGP61981 247 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTPN11-204ENST00000531326 ARID5AQ03989 594 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 ZNF234Q14588 700 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 SYCP2LQ5T4T6 812 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 TMEM215Q68D42 235 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 ANKS1BQ7Z6G8 1248 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 ZNF677Q86XU0 584 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 FAM217AQ8IXS0 508 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 CPXM2Q8N436 756 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 CPLX3Q8WVH0 158 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 SORCS1Q8WY21 1168 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 DNASE2BQ8WZ79 361 aa18.59■□□□□ 0.57
PTPN11-204ENST00000531326 MRFAP1L1Q96HT8 127 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms