RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 UBXN11Q5T124 520 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 TTC39BQ5VTQ0 682 aaPredicted RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 DAB2IPQ5VWQ8 1189 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 CST9Q5W186 159 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 PMF1Q6P1K2 205 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 DARS2Q6PI48 645 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 RGS9BPQ6ZS82 235 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 CYP4V2Q6ZWL3 525 aaPredicted RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 PDZD4Q76G19 769 aaPredicted RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 BEND5Q7L4P6 421 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 ACOT1Q86TX2 421 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 EXOC3L1Q86VI1 746 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 TTC30AQ86WT1 665 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 TRIM42Q8IWZ5 723 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 ADGRF2Q8IZF7 708 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 EMC1Q8N766 993 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 NAT8LQ8N9F0 302 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 B3GALNT2Q8NCR0 500 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 MCUQ8NE86 351 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 GPR152Q8TDT2 470 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 EPS8L3Q8TE67 593 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 PYROXD1Q8WU10 500 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 FAM172AQ8WUF8 416 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 KBTBD7Q8WVZ9 684 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 DNAJB3Q8WWF6 145 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 ZBTB10Q96DT7 871 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 CABS1Q96KC9 395 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 UROC1Q96N76 676 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 ZMAT2Q96NC0 199 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 ZNF317Q96PQ6 595 aaPredicted RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 PPP1R10Q96QC0 940 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 CYTH2Q99418 400 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 SELENOSQ9BQE4 189 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 MRPL45Q9BRJ2 306 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 TMEM121Q9BTD3 319 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 DUSP16Q9BY84 665 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 SEZ6LQ9BYH1 1024 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 PBX4Q9BYU1 374 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 KLC2Q9H0B6 622 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 BRD8Q9H0E9 1235 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 NXF3Q9H4D5 531 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 ACSS3Q9H6R3 686 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 C7orf69Q9H7B7 122 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 PCDH18Q9HCL0 1135 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 XAB2Q9HCS7 855 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 PNPLA8Q9NP80 782 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 SAYSD1Q9NPB0 183 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 PPANQ9NQ55 473 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 ABI2Q9NYB9 513 aaPredicted RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.77□□□□□ -1.49
PCF11-205ENST00000530906 SAMD15Q9P1V8 674 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 PSMC3IPQ9P2W1 217 aaPredicted RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 TUBGCP4Q9UGJ1 667 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 DSEQ9UL01 958 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 FNDC3AQ9Y2H6 1198 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 IPPQ9Y573 584 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 TMEM120BA0PK00 339 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 FAM170AA1A519 330 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 HMX2A2RU54 273 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 FAM47DPA6NHR8 397 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 PRR19A6NJB7 356 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 C9IYK1 514 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 H3BRJ5 948 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 TRDMT1O14717 391 aaKnown RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 NCAM2O15394 837 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 SEPT4O43236 478 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 TREHO43280 583 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 MTSS1O43312 755 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 GCATO75600 419 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 FSBPO95073 299 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 ZBED1O96006 694 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 F9P00740 461 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 THP07101 528 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 GSTA1P08263 222 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 RARBP10826 455 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 CYBAP13498 195 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 NPR3P17342 541 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 TPSB2P20231 275 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 DRD4P21917 467 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 GBP2P32456 591 aaPredicted RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 STX2P32856 288 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 HTR7P34969 479 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 RPL22P35268 128 aaKnown RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 ARL4AP40617 200 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 TM4SF4P48230 202 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 HCAR3P49019 387 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 VPS41P49754 854 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 IFI35P80217 286 aaPredicted RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 SCAPQ12770 1279 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 PDIA2Q13087 525 aaKnown RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 KCNJ11Q14654 390 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 TRIP13Q15645 432 aaPredicted RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 TPSAB1Q15661 275 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 MAPRE1Q15691 268 aaKnown RBP5.76□□□□□ -1.49
PCF11-205ENST00000530906 LONRF1Q17RB8 773 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 SMTNL2Q2TAL5 461 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 SLC45A4Q5BKX6 768 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 ANKRD20A8PQ5CZ79 823 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 LGSNQ5TDP6 509 aa5.76□□□□□ -1.49
PCF11-205ENST00000530906 RNF43Q68DV7 783 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms