RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 C12orf40Q86WS4 652 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 BBS7Q8IWZ6 715 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 RPLP0P6Q8NHW5 317 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 USP33Q8TEY7 942 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 GAB3Q8WWW8 586 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 KCTD13Q8WZ19 329 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 SECISBP2LQ93073 1101 aaKnown RBP7.41□□□□□ -1.22
ITGB1-218ENST00000528877 HEXIM2Q96MH2 286 aaKnown RBP7.41□□□□□ -1.22
ITGB1-218ENST00000528877 NT5C1BQ96P26 610 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 MRPL18Q9H0U6 180 aaKnown RBP7.41□□□□□ -1.22
ITGB1-218ENST00000528877 SPHK2Q9NRA0 654 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 CHORDC1Q9UHD1 332 aaPredicted RBP7.41□□□□□ -1.22
ITGB1-218ENST00000528877 RWDD2AQ9UIY3 292 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 TSPAN16Q9UKR8 245 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 KIAA1257Q9ULG3 409 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 MMP17Q9ULZ9 603 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 TRIM33Q9UPN9 1127 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 CNTN6Q9UQ52 1028 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 SH3BP1Q9Y3L3 701 aa7.41□□□□□ -1.22
ITGB1-218ENST00000528877 FZD6O60353 706 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 FOXD2O60548 495 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-218ENST00000528877 STC2O76061 302 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 KAT7O95251 611 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 APBB3O95704 486 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 AFPP02771 609 aaKnown RBP7.4□□□□□ -1.22
ITGB1-218ENST00000528877 VDRP11473 427 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 RARGP13631 454 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 EDN3P14138 238 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 GRIA2P42262 883 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 TNFRSF4P43489 277 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 KIR2DL1P43626 348 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-218ENST00000528877 FNTBP49356 437 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 MRPS21P82921 87 aaKnown RBP7.4□□□□□ -1.22
ITGB1-218ENST00000528877 LMNB2Q03252 620 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 MESP2Q0VG99 397 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 ZNF211Q13398 564 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-218ENST00000528877 DMC1Q14565 340 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 GOLGA7BQ2TAP0 167 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 KLHL10Q6JEL2 608 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 LCLAT1Q6UWP7 414 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 ERMP1Q7Z2K6 904 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 FAM217AQ8IXS0 508 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 TERB1Q8NA31 727 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 LOXL4Q96JB6 756 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 ZC3H10Q96K80 434 aaKnown RBP7.4□□□□□ -1.22
ITGB1-218ENST00000528877 CNOT6LQ96LI5 555 aaKnown RBP7.4□□□□□ -1.22
ITGB1-218ENST00000528877 PNKPQ96T60 521 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 NACA2Q9H009 215 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 CNGB3Q9NQW8 809 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 OLA1Q9NTK5 396 aaKnown RBP7.4□□□□□ -1.22
ITGB1-218ENST00000528877 DLL3Q9NYJ7 618 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 NCDNQ9UBB6 729 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 SALL4Q9UJQ4 1053 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 LSM7Q9UK45 103 aaKnown RBP7.4□□□□□ -1.22
ITGB1-218ENST00000528877 GMEB2Q9UKD1 530 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 RAB23Q9ULC3 237 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.4□□□□□ -1.22
ITGB1-218ENST00000528877 SLC8A2Q9UPR5 921 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 ZNF510Q9Y2H8 683 aa7.4□□□□□ -1.22
ITGB1-218ENST00000528877 PLXND1Q9Y4D7 1925 aa7.4□□□□□ -1.23
ITGB1-218ENST00000528877 EML5Q05BV3 1969 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 GTPBP10A4D1E9 387 aaKnown RBP7.39□□□□□ -1.23
ITGB1-218ENST00000528877 PRR5-ARHGAP8B1AHC4 643 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 BIN1O00499 593 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 NDUFB5O43674 189 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 TULP3O75386 442 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 DEAF1O75398 565 aaPredicted RBP7.39□□□□□ -1.23
ITGB1-218ENST00000528877 TNFRSF21O75509 655 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 RPP40O75818 363 aaKnown RBP7.39□□□□□ -1.23
ITGB1-218ENST00000528877 EPN2O95208 641 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 FGFR1OPO95684 399 aaKnown RBP7.39□□□□□ -1.23
ITGB1-218ENST00000528877 LATS1O95835 1130 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 TBX18O95935 607 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 ZBED1O96006 694 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 PENKP01210 267 aaPredicted RBP7.39□□□□□ -1.23
ITGB1-218ENST00000528877 APODP05090 189 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 FURINP09958 794 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 CCDC192P0DO97 292 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 RALAP11233 206 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 RPL34P49207 117 aaKnown RBP7.39□□□□□ -1.23
ITGB1-218ENST00000528877 TKTL1P51854 596 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 DGKEP52429 567 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 YWHAGP61981 247 aaKnown RBP eCLIP7.39□□□□□ -1.23
ITGB1-218ENST00000528877 COG7P83436 770 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 ARHGAP8P85298 464 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 ATP11AP98196 1134 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 DOC2BQ14184 412 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 SIM2Q14190 667 aaPredicted RBP7.39□□□□□ -1.23
ITGB1-218ENST00000528877 CRY1Q16526 586 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 C10orf120Q5SQS8 335 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 RNF43Q68DV7 783 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 ISM2Q6H9L7 571 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 MSANTD2Q6P1R3 559 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 ENOSF1Q7L5Y1 443 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 TRMT11Q7Z4G4 463 aaKnown RBP7.39□□□□□ -1.23
ITGB1-218ENST00000528877 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.39□□□□□ -1.23
ITGB1-218ENST00000528877 C11orf74Q86VG3 221 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 TMEM25Q86YD3 366 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 IL17RCQ8NAC3 791 aa7.39□□□□□ -1.23
ITGB1-218ENST00000528877 MLKLQ8NB16 471 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms