RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 C10orf107Q8IVU9 208 aa11.99□□□□□ -0.49
LINC01001-201ENST00000526704 KBTBD7Q8WVZ9 684 aa11.99□□□□□ -0.49
LINC01001-201ENST00000526704 CDKL2Q92772 493 aa11.99□□□□□ -0.49
LINC01001-201ENST00000526704 GATA6Q92908 595 aa11.99□□□□□ -0.49
LINC01001-201ENST00000526704 CEP41Q9BYV8 373 aa11.99□□□□□ -0.49
LINC01001-201ENST00000526704 VCXQ9H320 206 aa11.99□□□□□ -0.49
LINC01001-201ENST00000526704 DDX43Q9NXZ2 648 aaKnown RBP11.99□□□□□ -0.49
LINC01001-201ENST00000526704 IL1RAPL1Q9NZN1 696 aa11.99□□□□□ -0.49
LINC01001-201ENST00000526704 FZD10Q9ULW2 581 aa11.99□□□□□ -0.49
LINC01001-201ENST00000526704 DERAQ9Y315 318 aa11.99□□□□□ -0.49
LINC01001-201ENST00000526704 ENO4A6NNW6 628 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 SERPINE1P05121 402 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 PSMB4P28070 264 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 AP2B1P63010 937 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 SLC25A3Q00325 362 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 PDE1BQ01064 536 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 NAB1Q13506 487 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 ZBTB6Q15916 424 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 PPM1JQ5JR12 505 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 GLRA4Q5JXX5 417 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 MARCH8Q5T0T0 291 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 OTUD1Q5VV17 481 aaPredicted RBP11.98□□□□□ -0.49
LINC01001-201ENST00000526704 TAPT1Q6NXT6 567 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 RASSF3Q86WH2 238 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 FAM131BQ86XD5 332 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 HACE1Q8IYU2 909 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 GPC2Q8N158 579 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 LRRC52Q8N7C0 313 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 ANKRD52Q8NB46 1076 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 C16orf70Q9BSU1 422 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 RNF19AQ9NV58 838 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 NDE1Q9NXR1 346 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC01001-201ENST00000526704 DNAJB4Q9UDY4 337 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 SCOCQ9UIL1 159 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 OPHN1O60890 802 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 SIN3BO75182 1162 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 CYP2C8P10632 490 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 ARL4AP40617 200 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 TMCO4Q5TGY1 634 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 RNF220Q5VTB9 566 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 AP1ARQ63HQ0 302 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 DPY19L2Q6NUT2 758 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 IZUMO2Q6UXV1 221 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 STRADAQ7RTN6 431 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 POU5F2Q8N7G0 328 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 GSTCDQ8NEC7 633 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 PPTC7Q8NI37 304 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 P2RY11Q96G91 374 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 EIF2AQ9BY44 585 aaKnown RBP11.98□□□□□ -0.49
LINC01001-201ENST00000526704 PLEKHA5Q9HAU0 1116 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 TMPRSS4Q9NRS4 437 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 PNPOQ9NVS9 261 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 DNAJC28Q9NX36 388 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 DCDC2Q9UHG0 476 aa11.98□□□□□ -0.49
LINC01001-201ENST00000526704 EME2A4GXA9 379 aaPredicted RBP11.97□□□□□ -0.49
LINC01001-201ENST00000526704 ASB14A6NK59 587 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 ZNF195O14628 629 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 ADCY6O43306 1168 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 BUD23O43709 281 aaKnown RBP11.97□□□□□ -0.49
LINC01001-201ENST00000526704 PDGFRBP09619 1106 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 ALOX15P16050 662 aaPredicted RBP11.97□□□□□ -0.49
LINC01001-201ENST00000526704 LMO2P25791 158 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 HOXA11P31270 313 aaPredicted RBP11.97□□□□□ -0.49
LINC01001-201ENST00000526704 GLUD2P49448 558 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 SULT1E1P49888 294 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 IDH3AP50213 366 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 DSG1Q02413 1049 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 FOXB2Q5VYV0 432 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 C9orf57Q5W0N0 161 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 BSPRYQ5W0U4 402 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 POTEAQ6S8J7 498 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 ERO1BQ86YB8 467 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 ATP2A3Q93084 1043 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 PGLYRP2Q96PD5 576 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 TTC1Q99614 292 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 MROH8Q9H579 483 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 TMEM216Q9P0N5 145 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 RCOR3Q9P2K3 495 aaPredicted RBP11.97□□□□□ -0.49
LINC01001-201ENST00000526704 APOBEC2Q9Y235 224 aaKnown RBP11.97□□□□□ -0.49
LINC01001-201ENST00000526704 HES2Q9Y543 173 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 NUP205Q92621 2012 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 MAGEA13PA6NCF6 341 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 CXCL11O14625 94 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 FESP07332 822 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 ERVK-10P10266 1014 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 CRABP2P29373 138 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 MATKP42679 507 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 CACNA2D1P54289 1103 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 PITX1P78337 314 aaPredicted RBP11.97□□□□□ -0.49
LINC01001-201ENST00000526704 HIC1Q14526 733 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 GRIK4Q16099 956 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 GSTA3Q16772 222 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 RALGPS1Q5JS13 557 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 CES3Q6UWW8 571 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 RAPH1Q70E73 1250 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 RSPH3Q86UC2 560 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 CCNJLQ8IV13 435 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 BEST2Q8NFU1 509 aa11.97□□□□□ -0.49
LINC01001-201ENST00000526704 NDRG1Q92597 394 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms