RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 DMAC2Q9NW81 257 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 FBXL12Q9NXK8 326 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 GGA2Q9UJY4 613 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 SCML1Q9UN30 329 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 FRMD4BQ9Y2L6 1034 aa8.28□□□□□ -1.08
NSMCE2-213ENST00000523824 YKT6O15498 198 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 CUTAO60888 179 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 ZBED1O96006 694 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 WNT1P04628 370 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 SLFN14P0C7P3 912 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 ARRB1P49407 418 aaPredicted RBP8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 ACADVLP49748 655 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 GALCP54803 685 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 CXADRP78310 365 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 CUL4AQ13619 759 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 CUL4BQ13620 913 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 SHBQ15464 509 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 TAF1BQ53T94 588 aaPredicted RBP8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 ADGRF1Q5T601 910 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 FBXL19Q6PCT2 694 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 NCEH1Q6PIU2 408 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 KIAA0907Q7Z7F0 614 aaPredicted RBP8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 ADIPOR2Q86V24 386 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 PIGZQ86VD9 579 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 ZNF396Q96N95 335 aaPredicted RBP8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 OMDQ99983 421 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 BACH2Q9BYV9 841 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 UBXN6Q9BZV1 441 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 NIF3L1Q9GZT8 377 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 RSPH9Q9H1X1 276 aaPredicted RBP8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 PABPC3Q9H361 631 aaKnown RBP8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 APOBEC3GQ9HC16 384 aaKnown RBP8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 OLA1Q9NTK5 396 aaKnown RBP8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 MTMR6Q9Y217 621 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 HBS1LQ9Y450 684 aaKnown RBP8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 SHROOM3Q8TF72 1996 aa8.27□□□□□ -1.09
NSMCE2-213ENST00000523824 MYH10P35580 1976 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 KNTC1P50748 2209 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 A0A1W2PP55 124 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 TLR4O00206 839 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 PDXKO00764 312 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 MID1O15344 667 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 CALUO43852 315 aaPredicted RBP8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 BRINP1O60477 761 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 TBL1XO60907 577 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 SIN3BO75182 1162 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 RNASEH2AO75792 299 aaKnown RBP8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 LATS1O95835 1130 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 NR3C1P04150 777 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 CKMT2P17540 419 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 GLDCP23378 1020 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 EPHA8P29322 1005 aaPredicted RBP8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 CD70P32970 193 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 GCLMP48507 274 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 VAMP7P51809 220 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 TKTL1P51854 596 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 TLE3Q04726 772 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 BNIP3Q12983 259 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 STK4Q13043 487 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 ILKQ13418 452 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 CST6Q15828 149 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 KMT5BQ4FZB7 885 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 SLC45A4Q5BKX6 768 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 RAB41Q5JT25 222 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 C1orf220Q5T0J3 134 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 SHC4Q6S5L8 630 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 DHX40Q8IX18 779 aaKnown RBP8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 ZC3H3Q8IXZ2 948 aaKnown RBP8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 OXR1Q8N573 874 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 ZNF557Q8N988 423 aaPredicted RBP8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 OR2T34Q8NGX1 318 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 TAS1R2Q8TE23 839 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 TMEM174Q8WUU8 243 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 TSC1Q92574 1164 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 NDRG1Q92597 394 aaKnown RBP8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 SERAC1Q96JX3 654 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 LGMNQ99538 433 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 ULBP1Q9BZM6 244 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 NEUROG2Q9H2A3 272 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 MTG2Q9H4K7 406 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 MMRN2Q9H8L6 949 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 EBF2Q9HAK2 575 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 LRRC4Q9HBW1 653 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 EXOC1Q9NV70 894 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 FAM13BQ9NYF5 915 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 STIM2Q9P246 746 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 SFMBT1Q9UHJ3 866 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 CLCA2Q9UQC9 943 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 NUMA1Q14980 2115 aa8.26□□□□□ -1.09
NSMCE2-213ENST00000523824 CKAP5Q14008 2032 aa8.25□□□□□ -1.09
NSMCE2-213ENST00000523824 A0A1W2PR77 199 aa8.25□□□□□ -1.09
NSMCE2-213ENST00000523824 ERVH48-1M5A8F1 160 aa8.25□□□□□ -1.09
NSMCE2-213ENST00000523824 WNT9AO14904 365 aa8.25□□□□□ -1.09
NSMCE2-213ENST00000523824 TRIM49P0CI25 452 aa8.25□□□□□ -1.09
NSMCE2-213ENST00000523824 TRIM49CP0CI26 452 aa8.25□□□□□ -1.09
NSMCE2-213ENST00000523824 KRT13P13646 458 aa8.25□□□□□ -1.09
NSMCE2-213ENST00000523824 PDIA4P13667 645 aaKnown RBP8.25□□□□□ -1.09
NSMCE2-213ENST00000523824 SLC8A1P32418 973 aa8.25□□□□□ -1.09
NSMCE2-213ENST00000523824 SLC11A2P49281 568 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms