RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SYT17Q9BSW7 474 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 NT5C3AQ9H0P0 336 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 TTC12Q9H892 705 aaPredicted RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 SCPEP1Q9HB40 452 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 IL1RAPL2Q9NP60 686 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 PIM2Q9P1W9 311 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 DKK3Q9UBP4 350 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 EBF1Q9UH73 591 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 TUBE1Q9UJT0 475 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 ANAPC2Q9UJX6 822 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 PADI1Q9ULC6 663 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 PIN4Q9Y237 131 aaKnown RBP4.24□□□□□ -1.73
SKP1-209ENST00000522552 PCDHA5Q9Y5H7 936 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 ENTPD2Q9Y5L3 495 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 CDY1Q9Y6F8 540 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 COL15A1P39059 1388 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 ATRNL1Q5VV63 1379 aa4.24□□□□□ -1.73
SKP1-209ENST00000522552 CCDC187A0A096LP49 1063 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 GOLGA6L10A0A0M3HER8 536 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 RNF103-CHMP3A0A140T963 221 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 TRBC2A0A5B9 178 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 OR6C76A6NM76 312 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 FAM25EA8MYX2 175 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 RNF103O00237 685 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 CACNB4O00305 520 aaPredicted RBP4.23□□□□□ -1.73
SKP1-209ENST00000522552 LDLRAD4O15165 306 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 TLR2O60603 784 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 PALMO75781 387 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 RECQL5O94762 991 aaPredicted RBP4.23□□□□□ -1.73
SKP1-209ENST00000522552 RASAL1O95294 804 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 GASTP01350 101 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 RB1P06400 928 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 INHBAP08476 426 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 ENO2P09104 434 aaPredicted RBP4.23□□□□□ -1.73
SKP1-209ENST00000522552 XRCC6P12956 609 aaKnown RBP eCLIP4.23□□□□□ -1.73
SKP1-209ENST00000522552 ACP5P13686 325 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 TYMPP19971 482 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 VIPR2P41587 438 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 RABIFP47224 123 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 LUMP51884 338 aaPredicted RBP4.23□□□□□ -1.73
SKP1-209ENST00000522552 EPHB3P54753 998 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 RTP1P59025 263 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 CD83Q01151 205 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 KRT17Q04695 432 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 TUBB2AQ13885 445 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 CAPSQ13938 189 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 KIR3DS1Q14943 382 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 STILQ15468 1287 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 HFEQ30201 348 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 CDC73Q6P1J9 531 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 OGFOD3Q6PK18 319 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 SARM1Q6SZW1 724 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 LINC00696Q6ZRV3 163 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 ZNF365Q70YC5 407 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 NBPF5PQ86XG9 351 aaPredicted RBP4.23□□□□□ -1.73
SKP1-209ENST00000522552 PROSER1Q86XN7 944 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 SIX6OS1Q8N1H7 587 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 FAM181AQ8N9Y4 354 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 DENND6BQ8NEG7 585 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 WDR48Q8TAF3 677 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 SLC2A12Q8TD20 617 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 IGDCC4Q8TDY8 1250 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 ABHD5Q8WTS1 349 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 GIMAP1Q8WWP7 306 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 GATA6Q92908 595 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 MASTLQ96GX5 879 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 WDR92Q96MX6 357 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 DGAT2Q96PD7 388 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 UBL7Q96S82 380 aaPredicted RBP4.23□□□□□ -1.73
SKP1-209ENST00000522552 NUDT22Q9BRQ3 303 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 TUBB2BQ9BVA1 445 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 SSBP4Q9BWG4 385 aaPredicted RBP4.23□□□□□ -1.73
SKP1-209ENST00000522552 CEP41Q9BYV8 373 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 CCDC134Q9H6E4 229 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 POLR1BQ9H9Y6 1135 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 MBNL1Q9NR56 388 aaKnown RBP4.23□□□□□ -1.73
SKP1-209ENST00000522552 SEMA3GQ9NS98 782 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 ZBTB40Q9NUA8 1239 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 ALKBH4Q9NXW9 302 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 DTLQ9NZJ0 730 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 MPP6Q9NZW5 540 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 JKAMPQ9P055 326 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 IL19Q9UHD0 177 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 SLC23A1Q9UHI7 598 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 SUFUQ9UMX1 484 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 CDYLQ9Y232 598 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 BTBD3Q9Y2F9 522 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 ZBTB1Q9Y2K1 713 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 PCDHGA5Q9Y5G8 931 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 PCDHGA1Q9Y5H4 931 aa4.23□□□□□ -1.73
SKP1-209ENST00000522552 TCRBV7S2A1N4TA0A589 114 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 OR2A25A4D2G3 310 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 C2orf81A6NN90 581 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 A8MVJ9 347 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 KCNJ18B7U540 433 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 TEX22C9J3V5 150 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 AP3B1O00203 1094 aa4.22□□□□□ -1.73
SKP1-209ENST00000522552 KIAA0391O15091 583 aaKnown RBP4.22□□□□□ -1.73
SKP1-209ENST00000522552 PRPF4O43172 522 aaKnown RBP eCLIP4.22□□□□□ -1.73
SKP1-209ENST00000522552 TEX33O43247 280 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms