RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 HELQQ8TDG4 1101 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 MTMR9Q96QG7 549 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 CORO1BQ9BR76 489 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 SHCBP1LQ9BZQ2 653 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 C1QTNF3-AMACRE9PGA6 284 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 GP5P40197 560 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 SNRPD1P62314 119 aaKnown RBP16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 XRCC4Q13426 336 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 CYP4Z1Q86W10 505 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 STK40Q8N2I9 435 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 KLHL28Q9NXS3 571 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 ST3GAL5Q9UNP4 418 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 FER1L4A9Z1Z3 1794 aa16.62■□□□□ 0.25
PCDHA3-201ENST00000522353 ANKRD63C9JTQ0 380 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 PDE2AO00408 941 aaPredicted RBP16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 STAU1O95793 577 aaKnown RBP16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 RRM2P31350 389 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 GRIK3Q13003 919 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 HLA-DQA1Q5Y7H0 255 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 ADCK1Q86TW2 530 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 L2HGDHQ9H9P8 463 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 A0A088AWK7 358 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 NDUFS2O75306 463 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 MPOP05164 745 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 ZNF10P21506 573 aaPredicted RBP16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 GRK4P32298 578 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 S100A5P33763 92 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 SEC24CP53992 1094 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 PDPK2PQ6A1A2 396 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 DCLRE1AQ6PJP8 1040 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 PLEKHM3Q6ZWE6 761 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 INPP5DQ92835 1189 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 REPS1Q96D71 796 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 PARVBQ9HBI1 364 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 BATF3Q9NR55 127 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 PSMA4P25789 261 aaKnown RBP16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 NUDT2P50583 147 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 ATP6AP1LQ52LC2 224 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 EARS2Q5JPH6 523 aaKnown RBP16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 HPS4Q9NQG7 708 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 CYP3A7-CYP3A51PA0A087WV96 503 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 CCDC85CA6NKD9 419 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 PARNO95453 639 aaKnown RBP16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 CYP3A7P24462 503 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 CD52P31358 61 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 GTF2BQ00403 316 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 RGS18Q9NS28 235 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 PCDHA3Q9Y5H8 950 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 H3BMM5 538 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 RNF103O00237 685 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 TRUB2O95900 331 aaKnown RBP16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 HSPA13P48723 471 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 SLC16A1P53985 500 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 MAD2L1Q13257 205 aaPredicted RBP16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 NR6A1Q15406 480 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 CRY2Q49AN0 593 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 DUSP28Q4G0W2 176 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 C16orf59Q7L2K0 433 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 CACUL1Q86Y37 369 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 NMRAL1Q9HBL8 299 aa16.61■□□□□ 0.25
PCDHA3-201ENST00000522353 CYP1A1P04798 512 aaPredicted RBP16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 CRABP2P29373 138 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 MIPP30301 263 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 PIK3CGP48736 1102 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 PSMD5Q16401 504 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 WDR59Q6PJI9 974 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 DNAJC9Q8WXX5 260 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 ACOX2Q99424 681 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 CDT1Q9H211 546 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 PHTF1Q9UMS5 762 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 DUSP10Q9Y6W6 482 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 IQGAP1P46940 1657 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 KCNK1O00180 336 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 MEIS2O14770 477 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 NDUFV1P49821 464 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 ALDH6A1Q02252 535 aaKnown RBP16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 SPANXN3Q5MJ09 141 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 FBXO25Q8TCJ0 367 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 MED8Q96G25 268 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 CDC42EP4Q9H3Q1 356 aaKnown RBP16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 NDUFB5O43674 189 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 CCNT2O60583 730 aaKnown RBP16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 ZBTB48P10074 688 aaPredicted RBP16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 PGAM1P18669 254 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 PTENP60484 403 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 CHRNB3Q05901 458 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 DEPDC1Q5TB30 811 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 KCNMB4Q86W47 210 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 CXorf40AQ8TE69 158 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 MAGEB18Q96M61 343 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 HIPK3Q9H422 1215 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 SLC28A3Q9HAS3 691 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 TMEM131LA2VDJ0 1609 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 WDR47O94967 919 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 TCF3P15923 654 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 PGS1Q32NB8 556 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 SERPINA13PQ6UXR4 307 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 TBL1YQ9BQ87 522 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 STK39Q9UEW8 545 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms