RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 KRT9P35527 623 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 ANP32AP39687 249 aaKnown RBP16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 COPAP53621 1224 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 RPS24P62847 133 aaKnown RBP16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 PTK2Q05397 1052 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 RAPGEF1Q13905 1077 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 ST3GAL2Q16842 350 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 TTC31Q49AM3 519 aaPredicted RBP16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 DCAF6Q58WW2 860 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 FAM133BQ5BKY9 247 aaKnown RBP16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 ZC3H12AQ5D1E8 599 aaKnown RBP16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 SYPL2Q5VXT5 272 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 PEAR1Q5VY43 1037 aaPredicted RBP16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 NADSYN1Q6IA69 706 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 OR6B2Q6IFH4 312 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 ATP6V0D2Q8N8Y2 350 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 NUP58Q9BVL2 599 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 NUP62CLQ9H1M0 184 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 CLSTN2Q9H4D0 955 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 USP36Q9P275 1121 aaKnown RBP16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 SLC12A6Q9UHW9 1150 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 DNAJC12Q9UKB3 198 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 CACNA1AO00555 2505 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 PLXND1Q9Y4D7 1925 aa16.74■□□□□ 0.27
IGHV3-42-201ENST00000520410 TNRC6BQ9UPQ9 1833 aaKnown RBP16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 F5H5T6 163 aa16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 PAPSS1O43252 624 aaPredicted RBP16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 TRUB2O95900 331 aaKnown RBP16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 DLDP09622 509 aaKnown RBP16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 CEACAM1P13688 526 aa16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 ABCB4P21439 1286 aa16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 PMLP29590 882 aa16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 YWHAZP63104 245 aaKnown RBP16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 MAN2A1Q16706 1144 aa16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 ADIPOR2Q86V24 386 aa16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 C1orf131Q8NDD1 294 aaKnown RBP16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 ZNF419Q96HQ0 510 aaPredicted RBP16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 PPP1R13BQ96KQ4 1090 aa16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 SLC4A5Q9BY07 1137 aa16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 THAP9Q9H5L6 903 aa16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 CYTH4Q9UIA0 394 aa16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 CNTN6Q9UQ52 1028 aa16.73■□□□□ 0.27
IGHV3-42-201ENST00000520410 A0A1B0GTW7 788 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 FAM47DPA6NHR8 397 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 BECN2A8MW95 431 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 RNASEH1O60930 286 aaKnown RBP16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 LUC7L3O95232 432 aaKnown RBP16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 FYNP06241 537 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 PNMA6AP0CW24 399 aaPredicted RBP16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 SPINK2P20155 84 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 CSRP1P21291 193 aaKnown RBP16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 TACR2P21452 398 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 PON1P27169 355 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 CSKP41240 450 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 CDK17Q00537 523 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 NME3Q13232 169 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 NNTQ13423 1086 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 ENPP2Q13822 863 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 DPCR1Q3MIW9 517 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 MS4A13Q5J8X5 152 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 MPP7Q5T2T1 576 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 LRSAM1Q6UWE0 723 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 MMS22LQ6ZRQ5 1243 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 METTL3Q86U44 580 aaKnown RBP16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 DHX40Q8IX18 779 aaKnown RBP16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 DEFB106AQ8N104 65 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 STK32AQ8WU08 396 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 MTG2Q9H4K7 406 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 CAPN10Q9HC96 672 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 PLCB1Q9NQ66 1216 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 DDIT4Q9NX09 232 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 SUN2Q9UH99 717 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 EIF2B4Q9UI10 523 aaKnown RBP16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 XPO7Q9UIA9 1087 aaKnown RBP16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 NCKAP1Q9Y2A7 1128 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 PCDHB9Q9Y5E1 797 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 DNAH14Q0VDD8 3507 aa16.72■□□□□ 0.27
IGHV3-42-201ENST00000520410 MYO18AQ92614 2054 aaKnown RBP16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 CEP192Q8TEP8 1941 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 SPAARA0A1B0GVQ0 90 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 FSBPO95073 299 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 ASLP04424 464 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 SNX16P57768 344 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 SIM1P81133 766 aaPredicted RBP16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 GRIK2Q13002 908 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 CAMK2GQ13555 558 aaPredicted RBP16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 TAF5Q15542 800 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 MEA1Q16626 185 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 PTPRNQ16849 979 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 PITRM1Q5JRX3 1037 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 EFHC1Q5JVL4 640 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 ZNF776Q68DI1 518 aaPredicted RBP16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 CIR1Q86X95 450 aaPredicted RBP16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 FIBINQ8TAL6 211 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 AZIN2Q96A70 460 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 MYEOVQ96EZ4 313 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 BTN2A3PQ96KV6 586 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 BTBD1Q9H0C5 482 aa16.71■□□□□ 0.27
IGHV3-42-201ENST00000520410 TMEM245Q9H330 911 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms