RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 C6P13671 934 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 CCR5P51681 352 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 GALCP54803 685 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 SLC8A3P57103 927 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 E2F1Q01094 437 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 KCNC4Q03721 635 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 SHBQ15464 509 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 TRIP4Q15650 581 aaPredicted RBP12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 PKDCCQ504Y2 493 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 ADGRF1Q5T601 910 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 SFMBT2Q5VUG0 894 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 SPOPLQ6IQ16 392 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 KIAA0907Q7Z7F0 614 aaPredicted RBP12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 LSMEM2Q8N112 164 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 DCBLD1Q8N8Z6 715 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 FAM181AQ8N9Y4 354 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 IQUBQ8NA54 791 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 DHX58Q96C10 678 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 ZNF578Q96N58 590 aaPredicted RBP12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 TWNKQ96RR1 684 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 OMDQ99983 421 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 MAGEF1Q9HAY2 307 aa12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 HBS1LQ9Y450 684 aaKnown RBP12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 ARID1BQ8NFD5 2236 aaPredicted RBP12.19□□□□□ -0.46
TMEM55A-202ENST00000518359 TLR4O00206 839 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 IKBKBO14920 756 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 MAGEC1O60732 1142 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 RNASEH2AO75792 299 aaKnown RBP12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 CD2BP2O95400 341 aaKnown RBP12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 HLA-DRAP01903 254 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 CD58P19256 250 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 ACP1P24666 158 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 RXRGP48443 463 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 NXPH1P58417 271 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 INSM1Q01101 510 aaPredicted RBP12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 EHHADHQ08426 723 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 CST6Q15828 149 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 E2F4Q16254 413 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 HS1BP3Q53T59 392 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 PPP1R26Q5T8A7 1209 aaPredicted RBP12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 KDM7AQ6ZMT4 941 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 SV2AQ7L0J3 742 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 CCDC150Q8NCX0 1101 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 TMC2Q8TDI7 906 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 SERAC1Q96JX3 654 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 C7orf25Q9BPX7 421 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 BACH2Q9BYV9 841 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 IRX2Q9BZI1 471 aaPredicted RBP12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 UBXN6Q9BZV1 441 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 SLC39A2Q9NP94 309 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 PPP4R2Q9NY27 417 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 STOML2Q9UJZ1 356 aa12.18□□□□□ -0.46
TMEM55A-202ENST00000518359 SPTA1P02549 2419 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 A0A1W2PP55 124 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 A0A1W2PR77 199 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 CYSRT1A8MQ03 144 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 ASLP04424 464 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 DLG4P78352 724 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 BNIP3Q12983 259 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 STK38Q15208 465 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 HNRNPA1L2Q32P51 320 aaKnown RBP12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 KMT5BQ4FZB7 885 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 MPP7Q5T2T1 576 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 ARHGAP40Q5TG30 622 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 FAM173BQ6P4H8 233 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 SND1Q7KZF4 910 aaKnown RBP eCLIP12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 SLC9A9Q8IVB4 645 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 FMNL3Q8IVF7 1028 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 DHX40Q8IX18 779 aaKnown RBP12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 TTC39CQ8N584 583 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 RNF139Q8WU17 664 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 KCNE4Q8WWG9 221 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 NAF1Q96HR8 494 aaKnown RBP12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 USP28Q96RU2 1077 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 NIF3L1Q9GZT8 377 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 NEUROG2Q9H2A3 272 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 EBF2Q9HAK2 575 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 SERGEFQ9UGK8 458 aa12.17□□□□□ -0.46
TMEM55A-202ENST00000518359 PVALEFA0A1B0GWK0 134 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 TYW5A2RUC4 315 aaKnown RBP12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 MID1O15344 667 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 IRAK2O43187 625 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 SIN3BO75182 1162 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 ZBED1O96006 694 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 MT-CO3P00414 261 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 CD70P32970 193 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 NUDT1P36639 197 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 TKTL1P51854 596 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 DAB2P98082 770 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 KCNJ12Q14500 433 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 RAB41Q5JT25 222 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 NAPEPLDQ6IQ20 393 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 PIGZQ86VD9 579 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 MMAAQ8IVH4 418 aaKnown RBP12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 MFN1Q8IWA4 741 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 CCDC117Q8IWD4 279 aaPredicted RBP12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 ZC3H3Q8IXZ2 948 aaKnown RBP12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 MFSD2AQ8NA29 543 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 KDM1BQ8NB78 822 aa12.16□□□□□ -0.46
TMEM55A-202ENST00000518359 OR14C36Q8NHC7 312 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms