RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 TRIP4Q15650 581 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 CNNM4Q6P4Q7 775 aa13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 KDM7AQ6ZMT4 941 aa13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 USP30Q70CQ3 517 aa13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 DHX40Q8IX18 779 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 WFDC5Q8TCV5 224 aa13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 TMA16Q96EY4 203 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 SERAC1Q96JX3 654 aa13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 HEXIM2Q96MH2 286 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 OMDQ99983 421 aa13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 IMPG2Q9BZV3 1241 aa13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 APOBEC3GQ9HC16 384 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 CPNE5Q9HCH3 593 aa13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 SFMBT1Q9UHJ3 866 aa13.78□□□□□ -0.2
POLR2J3-216ENST00000511773 A0A1W2PR77 199 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 CAPN8A6NHC0 703 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 LRRC72A6NJI9 287 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 MSI1O43347 362 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 RNASEH1O60930 286 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 SIN3BO75182 1162 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 CKMT2P17540 419 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 POLR2EP19388 210 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 TKTL1P51854 596 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 INSM1Q01101 510 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 CST6Q15828 149 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 ARHGAP40Q5TG30 622 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 CEP135Q66GS9 1140 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 PIGZQ86VD9 579 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 MMAAQ8IVH4 418 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 FAM181AQ8N9Y4 354 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 IQUBQ8NA54 791 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 NIF3L1Q9GZT8 377 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 NEUROG2Q9H2A3 272 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 MMRN2Q9H8L6 949 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 CYP3A43Q9HB55 503 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 SUN2Q9UH99 717 aa13.77□□□□□ -0.21
POLR2J3-216ENST00000511773 TLR4O00206 839 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 TBL1XO60907 577 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 SDC3O75056 442 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 NR3C1P04150 777 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 SYT1P21579 422 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 AFMP43652 599 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 PSMD8P48556 350 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 PCBP4P57723 403 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 TMPRSS3P57727 454 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 NXPH1P58417 271 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 ST8SIA6P61647 398 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 PDE4CQ08493 712 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 ILKQ13418 452 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 CUL4BQ13620 913 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 LY6DQ14210 128 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 C1orf220Q5T0J3 134 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 ADGRF1Q5T601 910 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 BROXQ5VW32 411 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 RFWD3Q6PCD5 774 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 KIAA0907Q7Z7F0 614 aaPredicted RBP13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 GRAMD1CQ8IYS0 662 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 DCBLD1Q8N8Z6 715 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 OR2T34Q8NGX1 318 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 RNF139Q8WU17 664 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 EDEM1Q92611 657 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 BACH2Q9BYV9 841 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 ULBP1Q9BZM6 244 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 SEMA4CQ9C0C4 833 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 DNAI2Q9GZS0 605 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 CLMPQ9H6B4 373 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 DMAC2Q9NW81 257 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 STIM2Q9P246 746 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 SCML1Q9UN30 329 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 PCDHB1Q9Y5F3 818 aa13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 MORC2Q9Y6X9 1032 aaPredicted RBP13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 NYNRINQ9P2P1 1898 aaKnown RBP13.76□□□□□ -0.21
POLR2J3-216ENST00000511773 PTPN13Q12923 2485 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 SPTLC2O15270 562 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 ZBED1O96006 694 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 TRIM49P0CI25 452 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 TRIM49CP0CI26 452 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 GCLMP48507 274 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 NASPP49321 788 aaPredicted RBP13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 ZNF445P59923 1031 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 RHDQ02161 417 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 SLC45A4Q5BKX6 768 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 SFMBT2Q5VUG0 894 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 ZNF248Q8NDW4 579 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 OR14C36Q8NHC7 312 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 TMC2Q8TDI7 906 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 TAS1R2Q8TE23 839 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 OLA1Q9NTK5 396 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 ADAMTS1Q9UHI8 967 aa13.75□□□□□ -0.21
POLR2J3-216ENST00000511773 GOLGA6L7A0A1B0GV03 622 aa13.74□□□□□ -0.21
POLR2J3-216ENST00000511773 IKBKBO14920 756 aa13.74□□□□□ -0.21
POLR2J3-216ENST00000511773 POLR2DO15514 142 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-216ENST00000511773 ARHGAP6O43182 974 aa13.74□□□□□ -0.21
POLR2J3-216ENST00000511773 MT-CO3P00414 261 aa13.74□□□□□ -0.21
POLR2J3-216ENST00000511773 MPOP05164 745 aa13.74□□□□□ -0.21
POLR2J3-216ENST00000511773 KRT10P13645 584 aa13.74□□□□□ -0.21
POLR2J3-216ENST00000511773 SLC8A1P32418 973 aa13.74□□□□□ -0.21
POLR2J3-216ENST00000511773 CSKP41240 450 aa13.74□□□□□ -0.21
POLR2J3-216ENST00000511773 CCR5P51681 352 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms