RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 TOP1MTQ969P6 601 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 GPR101Q96P66 508 aaPredicted RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 AGXT2Q9BYV1 514 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 LOC110117498-PIK3R3F6TDL0 507 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 NEDD8Q15843 81 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 PIK3R3Q92569 461 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 APOL2Q9BQE5 337 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 BCL7BQ9BQE9 202 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 RAD18Q9NS91 495 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 LSM7Q9UK45 103 aaKnown RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 MADDQ8WXG6 1647 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 PEPDP12955 493 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 HPCAL1P37235 193 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 SPAG16Q8N0X2 631 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 NRXN1Q9ULB1 1477 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 MMP13P45452 471 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 CD151P48509 253 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 GALNT18Q6P9A2 607 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 FAM228AQ86W67 206 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 NT5DC4Q86YG4 428 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 MAGED2Q9UNF1 606 aaPredicted RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 ASTN2O75129 1339 aaPredicted RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 ZNF608Q9ULD9 1512 aaPredicted RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 CELF4Q9BZC1 486 aaKnown RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 GNL1P36915 607 aaPredicted RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 TRAF2Q12933 501 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 KCTD21Q4G0X4 260 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 SLC44A2Q8IWA5 706 aaPredicted RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 LZTR1Q8N653 840 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 TRPV1Q8NER1 839 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 FCGR1BQ92637 280 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 DDX18Q9NVP1 670 aaKnown RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 USP31Q70CQ4 1352 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 TEX46H3BTG2 121 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 DDX3XO00571 662 aaKnown RBP eCLIP8.55□□□□□ -1.04
HTT-208ENST00000510626 TRMUO75648 421 aaKnown RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 VCLP18206 1134 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 NYAP2Q9P242 653 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 PCDHA3Q9Y5H8 950 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 CCDC88CQ9P219 2028 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 TCP10L2B9ZVM9 353 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 STOX1Q6ZVD7 989 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 TUBA1CQ9BQE3 449 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 ARHGAP28Q9P2N2 729 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 IRAK3Q9Y616 596 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 PENKP01210 267 aaPredicted RBP8.55□□□□□ -1.04
HTT-208ENST00000510626 HSMCR30P0CW71 290 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 ETS1P14921 441 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 STX4Q12846 297 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 SUN5Q8TC36 379 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 GABBR1Q9UBS5 961 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 PEX16Q9Y5Y5 336 aa8.55□□□□□ -1.04
HTT-208ENST00000510626 UMPSP11172 480 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 DRD4P21917 467 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 EIF5AP63241 154 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 SV2CQ496J9 727 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 C5orf22Q49AR2 442 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 ZNF507Q8TCN5 953 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 IL1RL2Q9HB29 575 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 S100GP29377 79 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 PRKCIP41743 596 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 BCAT1P54687 386 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 N4BP2L1Q5TBK1 243 aaPredicted RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 RAB43Q86YS6 212 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 ABRAQ8N0Z2 381 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 ITFG1Q8TB96 612 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 FAM172AQ8WUF8 416 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 UBE2E3Q969T4 207 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 REEP1Q9H902 201 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 TBX20Q9UMR3 447 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 SYNPO2Q9UMS6 1093 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 MLYCDO95822 493 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 RAB2AP61019 212 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 C8orf37Q96NL8 207 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 RUVBL2Q9Y230 463 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 LOXHD1Q8IVV2 1947 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 MAGEB3O15480 346 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 RRP1BQ14684 758 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 DUSP12Q9UNI6 340 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 TRIM17Q9Y577 477 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 H0YJX3 145 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 IFNA7P01567 189 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 PTPN7P35236 360 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 EMC2Q15006 297 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 TWF2Q6IBS0 349 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 DCP1BQ8IZD4 617 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 ALLCQ8N6M5 410 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 NARS2Q96I59 477 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 PPP1R36Q96LQ0 422 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 MYH13Q9UKX3 1938 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 MGAT4DA6NG13 374 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 OPLAHO14841 1288 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 TULP3O75386 442 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 VDRP11473 427 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 LRPAP1P30533 357 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 PRR5LQ6MZQ0 368 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 SH3BP5LQ7L8J4 393 aa8.54□□□□□ -1.04
HTT-208ENST00000510626 PIWIL4Q7Z3Z4 852 aaKnown RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 SPATA2LQ8IUW3 424 aaPredicted RBP8.54□□□□□ -1.04
HTT-208ENST00000510626 ADGRE3Q9BY15 652 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms