RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 YWHAQP27348 245 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 GAD2Q05329 585 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 PREPLQ4J6C6 727 aaPredicted RBP9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 MDH1BQ5I0G3 518 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 LYSMD4Q5XG99 296 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 SLC36A4Q6YBV0 504 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 TTC30AQ86WT1 665 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 NUP93Q8N1F7 819 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 HMGB4Q8WW32 186 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 FRMD6Q96NE9 622 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 SLITRK1Q96PX8 696 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 MMS19Q96T76 1030 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 B3GNT5Q9BYG0 378 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 ELOVL4Q9GZR5 314 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 HSPBP1Q9NZL4 362 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 CHORDC1Q9UHD1 332 aaPredicted RBP9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 URB1O60287 2271 aaKnown RBP9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 ITPR1Q14643 2758 aa9.12□□□□□ -0.95
COL4A3BP-206ENST00000508809 APC2O95996 2303 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 A0A087X0B3 334 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 SPAARA0A1B0GVQ0 90 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 TCRBV21S2A2A0A5A6 115 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 TBC1D3BA6NDS4 549 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 SCAMP3O14828 347 aaKnown RBP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 COCHO43405 550 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 GREM1O60565 184 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 TULP3O75386 442 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 RTN3O95197 1032 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 MBL2P11226 248 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 CD59P13987 128 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 GABRG2P18507 467 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 MAP4P27816 1152 aaKnown RBP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 NTSR1P30989 418 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 TUBP50607 506 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 FAM193AP78312 1265 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 SIM1P81133 766 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 RING1Q06587 406 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 ZNF33AQ06730 810 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 HNRNPDQ14103 355 aaKnown RBP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 HECTD3Q5T447 861 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 KIAA1211LQ6NV74 962 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 PAQR9Q6ZVX9 377 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 ARMCX6Q7L4S7 300 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 HS2ST1Q7LGA3 356 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 TRMT11Q7Z4G4 463 aaKnown RBP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 RABEPKQ7Z6M1 372 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 TRIM42Q8IWZ5 723 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 CCDC65Q8IXS2 484 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 HDDC3Q8N4P3 179 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 ZNF513Q8N8E2 541 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 B3GALNT2Q8NCR0 500 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 PDZD8Q8NEN9 1154 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 OR6B3Q8NGW1 331 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 ZNF507Q8TCN5 953 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 ZCCHC14Q8WYQ9 949 aaKnown RBP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 ZNF419Q96HQ0 510 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 TRIM56Q9BRZ2 755 aaKnown RBP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 PANK2Q9BZ23 570 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 ZNF518BQ9C0D4 1074 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 GZF1Q9H116 711 aaPredicted RBP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 SNX25Q9H3E2 840 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 DPEP3Q9H4B8 488 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 ZDHHC4Q9NPG8 344 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 SPHK2Q9NRA0 654 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 COMMD8Q9NX08 183 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 BCCIPQ9P287 314 aaKnown RBP eCLIP9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 DEC1Q9P2X7 70 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 KLK13Q9UKR3 277 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 RNF112Q9ULX5 631 aa9.11□□□□□ -0.95
COL4A3BP-206ENST00000508809 PTPRBP23467 1997 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 IGHV1OR15-9A0A0B4J2B8 117 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 A0A1W2PQD8 194 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 CLDN5O00501 218 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 EIF3DO15371 548 aaKnown RBP eCLIP9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 TGFB1I1O43294 461 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 OPHN1O60890 802 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 ZNF217O75362 1048 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 GJB3O75712 270 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 DLGAP3O95886 979 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 ATICP31939 592 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 RDXP35241 583 aaKnown RBP9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 STAT6P42226 847 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 SNRPFP62306 86 aaKnown RBP9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 RPL6Q02878 288 aaKnown RBP9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 KDSRQ06136 332 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 GFPT1Q06210 699 aaPredicted RBP9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 SLC14A1Q13336 389 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 CUL4AQ13619 759 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 PSMD6Q15008 389 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 SLC39A14Q15043 492 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 SNRNP35Q16560 246 aaKnown RBP9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 WDR72Q3MJ13 1102 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 BTBD8Q5XKL5 378 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 CNNM4Q6P4Q7 775 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 PAOXQ6QHF9 649 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 STXBP4Q6ZWJ1 553 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 HTR3DQ70Z44 454 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 EPM2AIP1Q7L775 607 aaPredicted RBP9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 TMEM25Q86YD3 366 aa9.1□□□□□ -0.95
COL4A3BP-206ENST00000508809 MIB1Q86YT6 1006 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms