RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 STAT5AP42229 794 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 GLRBP48167 497 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 GSSP48637 474 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 CCR3P51677 355 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 STAT5BP51692 787 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 NEK3P51956 506 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 ENPEPQ07075 957 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 ANKS3Q6ZW76 656 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 FGD2Q7Z6J4 655 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 SATL1Q86VE3 508 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 FAM47BQ8NA70 645 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 RDH11Q8TC12 318 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 ACSF2Q96CM8 615 aaPredicted RBP7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 PNPLA8Q9NP80 782 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 KRCC1Q9NPI7 259 aaPredicted RBP7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 NYAP2Q9P242 653 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 ATP6V1HQ9UI12 483 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 DNPEPQ9ULA0 475 aa7.48□□□□□ -1.21
UBE2D3-224ENST00000508474 USP32Q8NFA0 1604 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 RNF17Q9BXT8 1623 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 TNS3Q68CZ2 1445 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 FAM95CA0A1B0GW59 222 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 KRT87PA6NCN2 255 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CAPN8A6NHC0 703 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 TRAFD1O14545 582 aaPredicted RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 NCAM2O15394 837 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 ZBTB11O95625 1053 aaPredicted RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CYP2C9P11712 490 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CCNB1P14635 433 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 WARSP23381 471 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 AVPR1AP37288 418 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 GRIA3P42263 894 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 GABRB2P47870 512 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 NPY2RP49146 381 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 PRIM2P49643 509 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 GCNT1Q02742 428 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 BTBD8Q5XKL5 378 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 ZNF544Q6NX49 715 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 ZCCHC23Q6ZST2 131 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 NCCRP1Q6ZVX7 275 aaPredicted RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 ZNF720Q7Z2F6 126 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 AHI1Q8N157 1196 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CYP4Z2PQ8N1L4 340 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 ALLCQ8N6M5 410 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 MRPL48Q96GC5 212 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 PI4K2AQ9BTU6 479 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 RIBC2Q9H4K1 309 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 VAV3Q9UKW4 847 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 GSTK1Q9Y2Q3 226 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 APOC4-APOC2K7ER74 178 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 MED24O75448 989 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 APOC2P02655 101 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 C6orf222P0C671 652 aaPredicted RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 NR2C2P49116 596 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 RGS7P49802 495 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 RIPPLY1Q0D2K3 151 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 DPYSL3Q14195 570 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 C5orf22Q49AR2 442 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 BICRALQ6AI39 1079 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 RBM15BQ8NDT2 890 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 FIG4Q92562 907 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CENPIQ92674 756 aaPredicted RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 KIF12Q96FN5 646 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 MLPHQ9BV36 600 aaPredicted RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CADM1Q9BY67 442 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 ROGDIQ9GZN7 287 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 SIK2Q9H0K1 926 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 EPB41L1Q9H4G0 881 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CHST12Q9NRB3 414 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 FAM49BQ9NUQ9 324 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 AGAP1Q9UPQ3 857 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 MAPRE3Q9UPY8 281 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 FADS3Q9Y5Q0 445 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 SLC30A1Q9Y6M5 507 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 GUCA1CO95843 209 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CCNE2O96020 404 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 ASLP04424 464 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 RASA1P20936 1047 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 UBAP2LQ14157 1087 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 SDE2Q6IQ49 451 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 GALNT18Q6P9A2 607 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 ALYREFQ86V81 257 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 RAB43Q86YS6 212 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 MCFD2Q8NI22 146 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 HM13Q8TCT9 377 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 TAMM41Q96BW9 452 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 ZNF570Q96NI8 536 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 PREBQ9HCU5 417 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 FBXO6Q9NRD1 293 aaPredicted RBP7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 RGS18Q9NS28 235 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CDH22Q9UJ99 828 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 NUDT5Q9UKK9 219 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 RAP2CQ9Y3L5 183 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 GJA3Q9Y6H8 435 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 ADGRB3O60242 1522 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 PTPRUQ92729 1446 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 IQGAP1P46940 1657 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 SF3B1O75533 1304 aaKnown RBP eCLIP7.47□□□□□ -1.212e-6■■■■■ 59.2
UBE2D3-224ENST00000508474 A0A087X1B8 175 aa7.47□□□□□ -1.21
UBE2D3-224ENST00000508474 CCDC162PA2VCL2 907 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms