RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 POLR2FP61218 127 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 DYNLT1P63172 113 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 KCNJ12Q14500 433 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 MESDQ14696 234 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 QPCTQ16769 361 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 DUSP6Q16828 381 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 MPPE1Q53F39 396 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GPR153Q6NV75 609 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 UNC13DQ70J99 1090 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 H2AFVQ71UI9 128 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 IQCF2Q8IXL9 164 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 RBM12BQ8IXT5 1001 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SYTL1Q8IYJ3 562 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 EPS8L1Q8TE68 723 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 USP13Q92995 863 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PHF21AQ96BD5 680 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 OTULINQ96BN8 352 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GDAP1L1Q96MZ0 367 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TRIM8Q9BZR9 551 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 DNAJC25Q9H1X3 360 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 WDR41Q9HAD4 459 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 DNAJC11Q9NVH1 559 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 IFNKQ9P0W0 207 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 APOBEC2Q9Y235 224 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 DERAQ9Y315 318 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PCDHA5Q9Y5H7 936 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 RALGAPA2Q2PPJ7 1873 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 RTTNQ86VV8 2226 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 A0A0G2JMZ2 1700 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 RP1P56715 2156 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CCDC162PA2VCL2 907 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 C2orf71A6NGG8 1288 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ERICH4A6NGS2 130 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CBX4O00257 560 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ACKR2O00590 384 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ZNF217O75362 1048 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 IGSF6O95976 241 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ANXA6P08133 673 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TAC1P20366 129 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 DRD1P21728 446 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ARHGAP8P85298 464 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TAGLNQ01995 201 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 MBTD1Q05BQ5 628 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 COX10Q12887 443 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TOB2Q14106 344 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SPDYE7PQ495Y7 208 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CFAP221Q4G0U5 840 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 VITQ6UXI7 678 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 RNF19BQ6ZMZ0 732 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CCDC121Q6ZUS5 278 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 IFT20Q8IY31 132 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SYT2Q8N9I0 419 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TMEM35BQ8NCS4 154 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CNOT6LQ96LI5 555 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 HERPUD2Q9BSE4 406 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SLC13A1Q9BZW2 595 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TRNAU1APQ9NX07 287 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CDH7Q9ULB5 785 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TCF20Q9UGU0 1960 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 H0YC42 278 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 KPNA3O00505 521 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TXNDC9O14530 226 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 MEIS2O14770 477 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 RASGRF2O14827 1237 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 FFAR2O15552 330 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 MBTPS2O43462 519 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SMIM24O75264 130 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 RFPL2O75678 378 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 F2P00734 622 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GLRA2P23416 452 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SDC4P31431 198 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CENPAP49450 140 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TKTL1P51854 596 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 BASP1P80723 227 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 HPCAP84074 193 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SULT2A1Q06520 285 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TCEAL1Q15170 157 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 NECTIN1Q15223 517 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SNX30Q5VWJ9 437 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 C11orf57Q6ZUT1 292 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 METTL3Q86U44 580 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SGMS1Q86VZ5 419 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GKN2Q86XP6 184 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ARL14EPQ8N8R7 260 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 HPS3Q969F9 1004 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TOP1MTQ969P6 601 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 C18orf25Q96B23 403 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SPDL1Q96EA4 605 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TMA16Q96EY4 203 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 MSANTD3Q96H12 275 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 RPRD1AQ96P16 312 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 LGMNQ99538 433 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GPR63Q9BZJ6 419 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 HEBP1Q9NRV9 189 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ABCC13Q9NSE7 274 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 DNAJC28Q9NX36 388 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PSD3Q9NYI0 1048 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SAE1Q9UBE0 346 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SLC39A10Q9ULF5 831 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ASB3Q9Y575 518 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms